CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97894	Canola	peroxisome	95.3	94.07
Bra039975.1-P	Field mustard	peroxisome	94.52	94.03
CDY62818	Canola	peroxisome	87.99	84.04
CDY31769	Canola	peroxisome	86.42	82.54
CDY57769	Canola	peroxisome	78.59	80.7
CDY55104	Canola	cytosol	79.11	80.59
AT2G30660.1	Thale cress	peroxisome	76.24	77.25
AT2G30650.1	Thale cress	peroxisome	74.41	75.4
CDY45442	Canola	mitochondrion	61.88	71.6
CDY45439	Canola	plastid	73.37	71.14
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	65.27	67.57
PGSC0003DMT400066411	Potato	nucleus	25.59	67.12
Solyc01g080930.2.1	Tomato	cytosol	65.27	65.27
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	25.33	65.1
PGSC0003DMT400004567	Potato	extracellular	22.19	64.39
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	11.23	63.24
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	61.88	62.53
KRH07311	Soybean	nucleus	63.19	62.53
EER91893	Sorghum	cytosol	61.36	60.88
PGSC0003DMT400066414	Potato	cytosol	27.15	60.82
PGSC0003DMT400066409	Potato	cytosol	21.93	60.43
TraesCS1B01G206000.1	Wheat	cytosol	59.79	60.1
TraesCS1D01G194800.2	Wheat	cytosol	59.53	59.84
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	41.51	59.77
PGSC0003DMT400000054	Potato	cytosol	59.79	59.64
PGSC0003DMT400066419	Potato	cytosol	36.81	58.75
Solyc01g094090.2.1	Tomato	cytosol	50.39	58.66
GSMUA_Achr5P13900_001	Banana	cytosol	47.52	58.33
TraesCS1A01G190800.1	Wheat	plastid	59.53	58.16
Zm00001d007746_P002	Maize	peroxisome	28.72	57.89
Zm00001d021132_P004	Maize	extracellular	60.84	57.67
Zm00001d007726_P001	Maize	peroxisome	36.81	57.55
GSMUA_Achr5P13870_001	Banana	cytosol	58.49	56.71
PGSC0003DMT400004521	Potato	cytosol	34.46	56.41
Zm00001d023779_P001	Maize	extracellular	56.4	55.96
GSMUA_Achr8P14800_001	Banana	cytosol	57.7	55.67
PGSC0003DMT400004585	Potato	extracellular	38.64	55.43
KXG29172	Sorghum	peroxisome	54.83	54.26
OQU84058	Sorghum	mitochondrion	57.44	53.66
HORVU1Hr1G049960.6	Barley	mitochondrion	58.49	53.08
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	49.61	48.59
Zm00001d007732_P002	Maize	extracellular	35.25	47.37
Zm00001d007740_P001	Maize	peroxisome	46.48	47.21
Os12t0264500-02	Rice	endoplasmic reticulum	59.01	44.05
Zm00001d007728_P001	Maize	cytosol	16.19	43.66
GSMUA_Achr5P13890_001	Banana	nucleus	17.23	41.25
CDX67831	Canola	mitochondrion	42.56	40.55
CDX98420	Canola	mitochondrion	42.56	40.55
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	23.76	40.44
CDX86518	Canola	cytosol	38.9	38.9
CDY23311	Canola	mitochondrion	40.73	38.05
CDY39880	Canola	mitochondrion	40.73	38.05
CDY15584	Canola	cytosol	37.6	37.99
Solyc01g108790.1.1	Tomato	nucleus	17.23	37.5
CDY72221	Canola	mitochondrion	19.32	35.58
CDY15581	Canola	cytosol	25.33	35.53
CDY15583	Canola	cytosol	32.9	34.15
CDY64934	Canola	cytosol	33.16	33.33
CDX86519	Canola	extracellular	16.45	31.82
CDY01126	Canola	mitochondrion, plastid	33.16	30.09
CDX93011	Canola	plastid	32.11	29.08
CDX94817	Canola	mitochondrion, plastid	31.85	28.84

Protein Annotations

EnsemblPlants:CDY31775	EnsemblPlantsGene:GSBRNA2T00050432001	Gene3D:3.90.226.40	GO:A0A078GZ77	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PFAM:PF16113
ProteinID:CDY31775	ProteinID:CDY31775.1	SUPFAM:SSF52096	UniParc:UPI0004EE5A34	UniProt:A0A078GZ77	MapMan:4.2.7.4
MapMan:4.2.7.6.1	:	:	:	:	:

Description

BnaA04g17110DBnaA04g17110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ77]

Coordinates

chrLK032278:-:459514..462372

Molecular Weight (calculated)

42455.7 Da

IEP (calculated)

8.631

GRAVY (calculated)

-0.033

Length

383 amino acids

Sequence
(BLAST)

001: MALESHSQIL VEEKPSVRIL TLNRPKQLNA LSLNMVTRLL QLFLAFEVDS TVKLVILKGQ GRAFCAGGDV SAVVRDIGLG KWRRSADFMS LEYTLNYVMA
101: TYCKAQISIL NGIVMGGGAG VCVHGRFRIA TENTVFAMPE TALGLFPDVG ASYFLSRLSG FFGEYVGLTG ARLNGAEMLA CGLATHFVPS TRLTALQADL
201: CKVGSSDPVT FASTILDAYT QHTHPERQSA FCRQVLSNVI NRCFSRRTIE EIMSALEIEA THKPDDWISA TIGALKKASP ASLKITLRSI REGRVQGVGQ
301: CLIRENRMVS HVMKGDISKD FVEGCRAILI DKDRNPKWEP RRLEDMKDIM VEQYFKRVEE EDGWEDLKLP PRKHLPASAI AKL

Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)

001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL

Arabidopsis Description

CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.