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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003309_P002
Zm00001d009716_P001
Zm00001d011373_P002
Zm00001d013426_P002
Zm00001d016081_P002
Zm00001d016248_P001
Zm00001d033751_P003
Zm00001d038775_P002
Zm00001d043563_P002
Zm00001d044191_P004
Zm00001d046072_P001
Zm00001d053382_P002

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65940.1 Zm00001d013426_P002 AT1G14830.1 21798944
AT5G65940.1 Zm00001d033751_P003 AT1G14830.1 21798944
AT5G65940.1 Zm00001d003309_P002 AT2G42490.1 21798944
AT5G65940.1 Zm00001d016248_P001 AT2G42790.1 21798944
AT5G65940.1 Zm00001d009716_P001 AT4G01090.1 21798944
AT5G65940.1 Zm00001d011373_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d016081_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d044191_P004 AT4G01090.1 21798944
AT5G65940.1 Zm00001d046072_P001 AT4G01090.1 21798944
AT5G65940.1 Zm00001d053382_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d038775_P002 AT5G56630.1 21798944
AT5G65940.1 Zm00001d043563_P002 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_15s0045g01170.t01 Wine grape cytosol 43.66 42.47
PGSC0003DMT400066419 Potato cytosol 41.55 24.58
Zm00001d007740_P001 Maize peroxisome 64.08 24.14
GSMUA_Achr5P13900_001 Banana cytosol 47.18 21.47
KXG29172 Sorghum peroxisome 57.75 21.19
Zm00001d021132_P004 Maize extracellular 56.34 19.8
TraesCS1B01G206000.1 Wheat cytosol 52.82 19.68
TraesCS1D01G194800.2 Wheat cytosol 52.82 19.68
TraesCS1A01G190800.1 Wheat plastid 52.82 19.13
PGSC0003DMT400004567 Potato extracellular 17.61 18.94
Zm00001d023779_P001 Maize extracellular 50.7 18.65
OQU84058 Sorghum mitochondrion 53.52 18.54
AT2G30660.1 Thale cress peroxisome 49.3 18.52
PGSC0003DMT400066409 Potato cytosol 17.61 17.99
HORVU1Hr1G049960.6 Barley mitochondrion 52.82 17.77
CDY57769 Canola peroxisome 46.48 17.69
Solyc01g094090.2.1 Tomato cytosol 40.85 17.63
VIT_09s0002g07160.t01 Wine grape mitochondrion, peroxisome, plastid 45.77 17.57
GSMUA_Achr5P13870_001 Banana cytosol 48.59 17.47
CDY55104 Canola cytosol 45.77 17.29
Bra031802.1-P Field mustard cytosol 45.77 17.29
Bra018392.1-P Field mustard cytosol 45.07 17.2
AT5G65940.1 Thale cress peroxisome 45.07 16.93
GSMUA_Achr8P14800_001 Banana cytosol 46.48 16.62
Solyc01g080930.2.1 Tomato cytosol 44.37 16.45
KRH07311 Soybean nucleus 44.37 16.28
CDX97894 Canola peroxisome 44.37 16.24
CDY62818 Canola peroxisome 45.77 16.21
CDY31775 Canola peroxisome 43.66 16.19
Bra039975.1-P Field mustard peroxisome 43.66 16.1
PGSC0003DMT400000054 Potato cytosol 42.96 15.89
Solyc01g108800.2.1 Tomato cytoskeleton, cytosol, peroxisome 41.55 15.57
Os12t0264500-02 Rice endoplasmic reticulum 55.63 15.4
AT2G30650.1 Thale cress peroxisome 40.85 15.34
Bra018395.1-P Field mustard cytosol 39.44 15.01
CDY31769 Canola peroxisome 42.25 14.96
PGSC0003DMT400000043 Potato cytosol, mitochondrion, peroxisome 27.46 14.66
Bra039968.1-P Field mustard peroxisome 40.85 14.54
CDY45442 Canola mitochondrion 29.58 12.69
CDY45439 Canola plastid 35.21 12.66
Zm00001d029860_P001 Maize plasma membrane 34.51 12.07
Zm00001d043490_P001 Maize cytosol, extracellular 26.06 9.64
Zm00001d007732_P002 Maize extracellular 19.01 9.47
GSMUA_Achr5P13890_001 Banana nucleus 8.45 7.5
Zm00001d046456_P009 Maize plastid 23.24 7.38
VIT_15s0045g01190.t01 Wine grape cytosol, nucleus, peroxisome 15.49 5.63
PGSC0003DMT400004585 Potato extracellular 8.45 4.49
PGSC0003DMT400066414 Potato cytosol 4.93 4.09
Solyc01g108790.1.1 Tomato nucleus 4.93 3.98
PGSC0003DMT400004521 Potato cytosol 6.34 3.85
PGSC0003DMT400066424 Potato cytosol, nucleus, plastid 1.41 2.94
Zm00001d007746_P002 Maize peroxisome 3.52 2.63
PGSC0003DMT400066411 Potato nucleus 1.41 1.37
CDY71268 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 1.41 1.34
Zm00001d007726_P001 Maize peroxisome 1.41 0.82
Protein Annotations
EnsemblPlants:Zm00001d007728_P001EnsemblPlants:Zm00001d007728_T001EnsemblPlantsGene:Zm00001d007728Gene3D:3.90.226.10GO:GO:0003674GO:GO:0003824
GO:GO:0003860GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:ClpP/crotonase-like_dom_sf
InterPro:HIBYL-CoA-HPANTHER:PTHR43176PANTHER:PTHR43176:SF3PFAM:PF16113ProteinID:ONM27480.1SUPFAM:SSF52096
TMHMM:TMhelixUniParc:UPI00084519B0UniProt:A0A1D6F8H6MapMan:35.1::
Description
3-hydroxyisobutyryl-CoA hydrolase 1
Coordinates
chr2:-:238238209..238243820
Molecular Weight (calculated)
15296.9 Da
IEP (calculated)
8.206
GRAVY (calculated)
0.450
Length
142 amino acids
Sequence
(BLAST)
001: MDAGGAVGGN SEQIKRLLRC FTAYVKDDGV KLLIIKGSGR AFCAGGDVVA CVQSINNGLL LWFHICSVGC VMCLLLKLDG WKWGDDFFRD QYFLNYIIAT
101: CIKPQISLLT GIVMGGGAGV SLHGRFRVAT DNTVCAIETK LT
Best Arabidopsis Sequence Match ( AT2G30660.1 )
(BLAST)
001: MASQSQVLVE EKSSVRILTL NRPKQLNALC FNMISRLLQL FRAYEEDPSV KLVILKGQGR AFCAGGDVPP VVQNMVQGKW RLGADFFRDQ YTLNYVMATY
101: SKPQVSILNG IVMGAGAGVS IHGRFRIATE NTVFAMPETS LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAELLACG LATHFVPSTR LTALETDLCK
201: VGSSDPSFVS TILDAYTQHP HLKQKSAYHR LDVIDRCFSK RTMEEIISAL ERETTQELDD WSLTTIRALK KSSPSSLKIS LRSIREGRLQ GVGHCLTREY
301: RMVCHVMKGD LSKDLVEGCR AILIDKDRNP KWEPRRLEDM KDSMVDQFFE RVEEEERWED LKLSPRNNLH ALRIAAKL
Arabidopsis Description
Probable 3-hydroxyisobutyryl-CoA hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.