Factsheet for Bra039975.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31775	Canola	peroxisome	94.03	94.52
Bra039968.1-P	Field mustard	peroxisome	84.16	81.2
Bra031802.1-P	Field mustard	cytosol	75.06	76.86
Bra018392.1-P	Field mustard	cytosol	72.47	75.0
AT2G30660.1	Thale cress	peroxisome	72.73	74.07
Bra018395.1-P	Field mustard	cytosol	70.13	72.39
AT2G30650.1	Thale cress	peroxisome	70.91	72.22
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	62.08	64.59
PGSC0003DMT400004567	Potato	extracellular	22.08	64.39
Solyc01g080930.2.1	Tomato	cytosol	61.82	62.14
PGSC0003DMT400066409	Potato	cytosol	22.08	61.15
PGSC0003DMT400066411	Potato	nucleus	22.86	60.27
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	58.44	59.37
KRH07311	Soybean	nucleus	59.22	58.91
GSMUA_Achr5P13900_001	Banana	cytosol	47.53	58.65
PGSC0003DMT400066419	Potato	cytosol	36.36	58.33
Solyc01g094090.2.1	Tomato	cytosol	49.35	57.75
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	39.74	57.52
EER91893	Sorghum	cytosol	57.4	57.25
PGSC0003DMT400000054	Potato	cytosol	56.36	56.51
TraesCS1B01G206000.1	Wheat	cytosol	55.84	56.43
TraesCS1D01G194800.2	Wheat	cytosol	55.58	56.17
TraesCS1A01G190800.1	Wheat	plastid	55.58	54.59
Zm00001d021132_P004	Maize	extracellular	57.14	54.46
GSMUA_Achr5P13870_001	Banana	cytosol	55.58	54.18
Zm00001d023779_P001	Maize	extracellular	54.03	53.89
Zm00001d007726_P001	Maize	peroxisome	33.51	52.65
GSMUA_Achr8P14800_001	Banana	cytosol	54.29	52.64
PGSC0003DMT400066414	Potato	cytosol	23.38	52.63
Zm00001d007746_P002	Maize	peroxisome	25.71	52.11
PGSC0003DMT400004521	Potato	cytosol	31.17	51.28
OQU84058	Sorghum	mitochondrion	54.29	50.98
KXG29172	Sorghum	peroxisome	51.17	50.9
PGSC0003DMT400004585	Potato	extracellular	34.81	50.19
HORVU1Hr1G049960.6	Barley	mitochondrion	54.81	50.0
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	8.31	47.06
Zm00001d007732_P002	Maize	extracellular	34.81	47.02
Zm00001d007740_P001	Maize	peroxisome	45.97	46.95
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	46.49	45.78
Zm00001d007728_P001	Maize	cytosol	16.1	43.66
Os12t0264500-02	Rice	endoplasmic reticulum	55.58	41.72
Bra003417.1-P	Field mustard	mitochondrion	38.96	37.5
Bra010664.1-P	Field mustard	cytosol	19.74	37.07
Bra030657.1-P	Field mustard	cytosol	36.1	36.97
Bra010219.1-P	Field mustard	mitochondrion	38.44	36.1
Bra030656.1-P	Field mustard	cytosol	30.65	32.69
GSMUA_Achr5P13890_001	Banana	nucleus	13.51	32.5
Solyc01g108790.1.1	Tomato	nucleus	13.77	30.11
Bra032700.1-P	Field mustard	plastid	30.39	27.66
Bra001946.1-P	Field mustard	plastid	29.35	26.71
Bra030655.1-P	Field mustard	extracellular	9.61	20.67

Protein Annotations

EnsemblPlants:Bra039975.1	EnsemblPlants:Bra039975.1-P	EnsemblPlantsGene:Bra039975	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PFAM:PF16113
SUPFAM:SSF52096	UniParc:UPI0002544236	UniProt:M4FFV1	MapMan:4.2.7.4	:	:

Description

AT5G65940 (E=3e-117) CHY1 | CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1); 3-hydroxyisobutyryl-CoA hydrolase

Coordinates

chrA04:-:13191181..13193882

Molecular Weight (calculated)

42781.1 Da

IEP (calculated)

8.383

GRAVY (calculated)

0.055

Length

385 amino acids

Sequence
(BLAST)

001: MALESHSQIL VEEKPSVRIL TLNRPKQLNA LSLNMVTRLL QLFLAFEVDS TVKLVILKGQ GRAFCAGGDV SAVVRDIVLG KWRRSADFMS LEYTLNYVMA
101: TYCKAQISIL NGIVMGGGAG VCVHGRFRIA TENTVFAMPE TALGLFPDVG ASYFLSRLSG FFGEYVGLTG ARLNGAEMLA CGLATHFVPS TRLTALQADL
201: CKVGSSDPVT FASTILDAYT QHTHPERQSA FYIQGKFVSP VSYLAIYFSL CRLDVINRCF SRRTIEEIMS ALEIEATHKP DDWISATIGA LKKASPASLK
301: ITLRSIREGR VQGVGQCLIR ENRMVSHVMK GDISKDFVEW EPRRLEDMKD IMVEQYFKRV EEEDGWEDLK LPPRKHLPAS AIAKL

Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)

001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL

Arabidopsis Description

CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.