Factsheet for Bra031802.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 1
peroxisome 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000943.1-P
Bra002801.1-P
Bra004720.1-P
Bra006864.1-P
Bra016679.1-P
Bra016871.1-P
Bra026801.1-P
Bra033014.1-P
Bra034778.1-P
Bra037384.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65940.1	Bra016679.1-P	AT1G14830.1	21798944
AT5G65940.1	Bra026801.1-P	AT1G14830.1	21798944
AT5G65940.1	Bra016871.1-P	AT2G42490.1	21798944
AT5G65940.1	Bra004720.1-P	AT2G42790.1	21798944
AT5G65940.1	Bra034778.1-P	AT3G12110.1	21798944
AT5G65940.1	Bra000943.1-P	AT4G01090.1	21798944
AT5G65940.1	Bra037384.1-P	AT4G01090.1	21798944
AT5G65940.1	Bra002801.1-P	AT5G56630.1	21798944
AT5G65940.1	Bra006864.1-P	AT5G56630.1	21798944
AT5G65940.1	Bra033014.1-P	AT5G56630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55104	Canola	cytosol	100.0	100.0
AT5G65940.1	Thale cress	peroxisome	85.9	85.45
Bra039968.1-P	Field mustard	peroxisome	81.65	76.94
Bra018392.1-P	Field mustard	cytosol	75.53	76.34
Bra039975.1-P	Field mustard	peroxisome	76.86	75.06
Bra018395.1-P	Field mustard	cytosol	73.67	74.26
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	69.95	71.08
Solyc01g080930.2.1	Tomato	cytosol	70.21	68.93
PGSC0003DMT400066411	Potato	nucleus	25.8	66.44
PGSC0003DMT400004567	Potato	extracellular	22.87	65.15
KRH07311	Soybean	nucleus	67.02	65.12
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	65.43	64.91
Solyc01g094090.2.1	Tomato	cytosol	55.59	63.53
EER91893	Sorghum	cytosol	64.89	63.21
PGSC0003DMT400000054	Potato	cytosol	64.36	63.02
TraesCS1B01G206000.1	Wheat	cytosol	62.23	61.42
TraesCS1D01G194800.2	Wheat	cytosol	62.23	61.42
PGSC0003DMT400066414	Potato	cytosol	27.93	61.4
GSMUA_Achr5P13900_001	Banana	cytosol	50.8	61.22
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	42.82	60.53
PGSC0003DMT400066409	Potato	cytosol	22.34	60.43
PGSC0003DMT400066419	Potato	cytosol	38.56	60.42
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	10.9	60.29
Zm00001d021132_P004	Maize	extracellular	64.63	60.15
Zm00001d007726_P001	Maize	peroxisome	39.1	60.0
Zm00001d007746_P002	Maize	peroxisome	30.05	59.47
TraesCS1A01G190800.1	Wheat	plastid	61.97	59.44
GSMUA_Achr5P13870_001	Banana	cytosol	62.23	59.24
PGSC0003DMT400004521	Potato	cytosol	36.7	58.97
Zm00001d023779_P001	Maize	extracellular	60.11	58.55
GSMUA_Achr8P14800_001	Banana	cytosol	60.9	57.68
PGSC0003DMT400004585	Potato	extracellular	40.43	56.93
KXG29172	Sorghum	peroxisome	58.51	56.85
OQU84058	Sorghum	mitochondrion	61.17	56.1
HORVU1Hr1G049960.6	Barley	mitochondrion	61.97	55.21
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	52.39	50.38
Zm00001d007740_P001	Maize	peroxisome	50.27	50.13
Zm00001d007732_P002	Maize	extracellular	36.7	48.42
Os12t0264500-02	Rice	endoplasmic reticulum	63.03	46.2
Zm00001d007728_P001	Maize	cytosol	17.29	45.77
Bra003417.1-P	Field mustard	mitochondrion	46.01	43.25
GSMUA_Achr5P13890_001	Banana	nucleus	18.35	43.12
Bra030657.1-P	Field mustard	cytosol	41.22	41.22
Bra010219.1-P	Field mustard	mitochondrion	43.62	40.0
Bra010664.1-P	Field mustard	cytosol	21.28	39.02
Solyc01g108790.1.1	Tomato	nucleus	17.55	37.5
Bra030656.1-P	Field mustard	cytosol	34.84	36.29
Bra032700.1-P	Field mustard	plastid	36.17	32.15
Bra001946.1-P	Field mustard	plastid	35.11	31.21
Bra030655.1-P	Field mustard	extracellular	12.5	26.26

Protein Annotations

EnsemblPlants:Bra031802.1	EnsemblPlants:Bra031802.1-P	EnsemblPlantsGene:Bra031802	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0006950	GO:GO:0008150	GO:GO:0009409	GO:GO:0009628	GO:GO:0016787
InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PFAM:PF16113	SUPFAM:SSF52096	UniParc:UPI0002546CBB
UniProt:M4ESM2	MapMan:4.2.7.4	MapMan:4.2.7.6.1	:	:	:

Description

AT5G65940 (E=1e-184) CHY1 | CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1); 3-hydroxyisobutyryl-CoA hydrolase

Coordinates

chrA02:+:27829455..27832145

Molecular Weight (calculated)

41783.6 Da

IEP (calculated)

7.790

GRAVY (calculated)

-0.102

Length

376 amino acids

Sequence
(BLAST)

001: MASHSQVLVE EKSSVRILTL NRPKQLNALS FQMISRLLQL FLAYEEDPSV KLVILKGQGR AFCAGGDVSA VVRDIGQGNW RLGAKFFADE YMLNYVMATY
101: TKPQVSILNG IVMGGGAGVS VHGPFRIATE NTVFAMPETV LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGADMLACG LATHYLPSTR LTALEAELCR
201: VDSSDPALVS TILDAYTQNP HLKQQSAYHR QVLDVIDRCF SGRTVEEIIA ALEREATHGG DDWISSTIRA LKKASPASLK ISLRSIREGR LQGVGQCLSR
301: EYRMVCHVLK GDISKDFVEG CRAILIDKDK NPKWEPWRLE EMKDRMVEQY FKRVEEEEDL KFPARKNLPA LAMAKL

Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)

001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL

Arabidopsis Description

CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.