Factsheet for HORVU1Hr1G049960.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G021800.1
HORVU0Hr1G030280.2
HORVU1Hr1G075550.1
HORVU1Hr1G092980.14
HORVU2Hr1G082420.6
HORVU3Hr1G055550.3
HORVU3Hr1G070300.3
HORVU4Hr1G007880.11
HORVU5Hr1G099820.5
HORVU6Hr1G053060.2
HORVU7Hr1G082720.10

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65940.1	HORVU4Hr1G007880.11	AT1G14830.1	21798944
AT5G65940.1	HORVU2Hr1G082420.6	AT2G42490.1	21798944
AT5G65940.1	HORVU6Hr1G053060.2	AT2G42490.1	21798944
AT5G65940.1	HORVU0Hr1G030280.2	AT2G42790.1	21798944
AT5G65940.1	HORVU5Hr1G099820.5	AT2G42790.1	21798944
AT5G65940.1	HORVU0Hr1G021800.1	AT4G01090.1	21798944
AT5G65940.1	HORVU1Hr1G092980.14	AT4G01090.1	21798944
AT5G65940.1	HORVU3Hr1G055550.3	AT4G01090.1	21798944
AT5G65940.1	HORVU7Hr1G082720.10	AT4G01090.1	21798944
AT5G65940.1	HORVU1Hr1G075550.1	AT5G56630.1	21798944
AT5G65940.1	HORVU3Hr1G070300.3	AT5G56630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G194800.2	Wheat	cytosol	85.31	94.49
TraesCS1B01G206000.1	Wheat	cytosol	85.31	94.49
TraesCS1A01G190800.1	Wheat	plastid	85.55	92.09
EER91893	Sorghum	cytosol	72.27	79.02
Zm00001d021132_P004	Maize	extracellular	71.33	74.5
Zm00001d007726_P001	Maize	peroxisome	42.42	73.06
KXG29172	Sorghum	peroxisome	65.88	71.83
Zm00001d023779_P001	Maize	extracellular	64.69	70.73
OQU84058	Sorghum	mitochondrion	68.25	70.24
Zm00001d007746_P002	Maize	peroxisome	31.28	69.47
PGSC0003DMT400004567	Potato	extracellular	20.38	65.15
VIT_15s0045g01170.t01	Wine grape	cytosol	22.51	65.07
PGSC0003DMT400066414	Potato	cytosol	26.07	64.33
Solyc01g080930.2.1	Tomato	cytosol	58.29	64.23
GSMUA_Achr5P13900_001	Banana	cytosol	47.16	63.78
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	55.69	63.51
KRH07311	Soybean	nucleus	57.82	63.05
AT5G65940.1	Thale cress	peroxisome	56.4	62.96
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	56.4	62.8
GSMUA_Achr8P14800_001	Banana	cytosol	59.0	62.72
PGSC0003DMT400066409	Potato	cytosol	20.62	62.59
CDY57769	Canola	peroxisome	55.21	62.47
PGSC0003DMT400066411	Potato	nucleus	21.56	62.33
AT2G30660.1	Thale cress	peroxisome	55.69	62.17
Bra031802.1-P	Field mustard	cytosol	55.21	61.97
CDY55104	Canola	cytosol	55.21	61.97
GSMUA_Achr5P13870_001	Banana	cytosol	57.58	61.52
Os12t0264500-02	Rice	endoplasmic reticulum	73.93	60.82
Zm00001d007740_P001	Maize	peroxisome	54.03	60.48
AT2G30650.1	Thale cress	peroxisome	54.03	60.32
Solyc01g094090.2.1	Tomato	cytosol	46.92	60.18
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	37.91	60.15
PGSC0003DMT400000054	Potato	cytosol	53.79	59.11
CDY31775	Canola	peroxisome	53.08	58.49
Bra018392.1-P	Field mustard	cytosol	50.95	57.8
CDX97894	Canola	peroxisome	52.84	57.47
Bra018395.1-P	Field mustard	cytosol	50.71	57.37
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	9.24	57.35
CDY62818	Canola	peroxisome	53.79	56.61
CDY45442	Canola	mitochondrion	44.31	56.5
PGSC0003DMT400066419	Potato	cytosol	31.99	56.25
Bra039968.1-P	Field mustard	peroxisome	53.08	56.14
CDY31769	Canola	peroxisome	53.32	56.11
PGSC0003DMT400004521	Potato	cytosol	30.81	55.56
Zm00001d007732_P002	Maize	extracellular	37.44	55.44
Bra039975.1-P	Field mustard	peroxisome	50.0	54.81
CDY45439	Canola	plastid	51.18	54.68
PGSC0003DMT400004585	Potato	extracellular	34.36	54.31
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	18.96	53.69
Zm00001d007728_P001	Maize	cytosol	17.77	52.82
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	42.18	45.52
GSMUA_Achr5P13890_001	Banana	nucleus	17.06	45.0
HORVU3Hr1G072100.2	Barley	cytosol	34.12	36.92
Solyc01g108790.1.1	Tomato	nucleus	14.93	35.8
HORVU7Hr1G085310.1	Barley	peroxisome	27.73	26.06

Protein Annotations

EnsemblPlants:HORVU1Hr1G049960.6	EnsemblPlantsGene:HORVU1Hr1G049960	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860
GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PFAM:PF16113	SEG:seg
SUPFAM:SSF52096	UniParc:UPI000B472ACD	UniProt:A0A287FHY3	MapMan:4.2.7.4	MapMan:4.2.7.6.1	:

Description

No Description!

Coordinates

chrchr1H:-:370562976..370570366

Molecular Weight (calculated)

46453.7 Da

IEP (calculated)

7.748

GRAVY (calculated)

-0.154

Length

422 amino acids

Sequence
(BLAST)

001: MSLRNWQPNR GVQLLPSPQP GFGVQLERLH WSSRFASPAD DMASPASSDS DQVLVEANGS TRTLILNRPK QLNALSSAMV TGLLKCFTSY EEENTVKLLI
101: VKGNGRAFCA GGDVAEVAQS INNDSWKYGA DFFRTEFLLN YIIATYSKPQ VSLLTGIVMG GGAGVSIHGR FRVATENTVF AMPETALGLF PDIGASYFLS
201: RLPGFYGEYV GLTGARLDGA EMLACGLATH FVPLNRMSLL EESLKRVDAS DPFAICGIID QFSKQPSLKG SSSLNRMDII NRCFSKGTVE EIISTLEQEA
301: PSVSDKLVTA AIQSLRKASP TSLKISLASI REGRLQTVGE CLRREYRMVC HVMRGDFSRD FFEGCRAILV DKDRNPKWMP PTLDQVHDGV VANYFSKVDD
401: PHWEDLNLPT RSSHGRRIVP KL

Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)

001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL

Arabidopsis Description

CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.