CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039968.1-P	Field mustard	peroxisome	99.25	99.75
CDY62818	Canola	peroxisome	93.27	93.27
CDX97894	Canola	peroxisome	84.54	87.37
CDY31775	Canola	peroxisome	82.54	86.42
CDY57769	Canola	peroxisome	76.31	82.04
CDY55104	Canola	cytosol	76.81	81.91
AT2G30660.1	Thale cress	peroxisome	75.31	79.89
AT2G30650.1	Thale cress	peroxisome	73.07	77.51
CDY45442	Canola	mitochondrion	60.35	73.11
CDY45439	Canola	plastid	71.07	72.15
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	25.69	69.13
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	61.6	66.76
Solyc01g080930.2.1	Tomato	cytosol	62.34	65.27
PGSC0003DMT400004567	Potato	extracellular	21.45	65.15
PGSC0003DMT400066411	Potato	nucleus	23.69	65.07
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	60.35	63.85
KRH07311	Soybean	nucleus	59.85	62.02
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	10.47	61.76
PGSC0003DMT400066409	Potato	cytosol	21.2	61.15
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	40.4	60.9
PGSC0003DMT400066414	Potato	cytosol	25.94	60.82
PGSC0003DMT400000054	Potato	cytosol	57.86	60.42
EER91893	Sorghum	cytosol	57.86	60.1
TraesCS1B01G206000.1	Wheat	cytosol	56.86	59.84
Zm00001d007726_P001	Maize	peroxisome	36.41	59.59
TraesCS1D01G194800.2	Wheat	cytosol	56.61	59.58
GSMUA_Achr5P13900_001	Banana	cytosol	45.64	58.65
Zm00001d007746_P002	Maize	peroxisome	27.68	58.42
Solyc01g094090.2.1	Tomato	cytosol	47.88	58.36
PGSC0003DMT400066419	Potato	cytosol	34.66	57.92
TraesCS1A01G190800.1	Wheat	plastid	56.61	57.91
GSMUA_Achr5P13870_001	Banana	cytosol	56.86	57.72
Zm00001d021132_P004	Maize	extracellular	57.36	56.93
PGSC0003DMT400004521	Potato	cytosol	33.17	56.84
PGSC0003DMT400004585	Potato	extracellular	37.66	56.55
GSMUA_Achr8P14800_001	Banana	cytosol	55.86	56.42
Zm00001d023779_P001	Maize	extracellular	53.62	55.7
KXG29172	Sorghum	peroxisome	52.37	54.26
OQU84058	Sorghum	mitochondrion	55.11	53.9
HORVU1Hr1G049960.6	Barley	mitochondrion	56.11	53.32
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	47.13	48.34
Zm00001d007740_P001	Maize	peroxisome	45.39	48.28
Zm00001d007732_P002	Maize	extracellular	34.16	48.07
Os12t0264500-02	Rice	endoplasmic reticulum	57.36	44.83
CDX67831	Canola	mitochondrion	43.14	43.03
CDX98420	Canola	mitochondrion	43.14	43.03
Zm00001d007728_P001	Maize	cytosol	14.96	42.25
GSMUA_Achr5P13890_001	Banana	nucleus	16.46	41.25
CDY23311	Canola	mitochondrion	40.65	39.76
CDY39880	Canola	mitochondrion	40.65	39.76
CDX86518	Canola	cytosol	37.91	39.69
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	22.19	39.56
CDY72221	Canola	mitochondrion	20.2	38.94
CDY15584	Canola	cytosol	36.66	38.79
Solyc01g108790.1.1	Tomato	nucleus	16.21	36.93
CDY15581	Canola	cytosol	24.94	36.63
CDY15583	Canola	cytosol	32.67	35.5
CDY64934	Canola	cytosol	31.67	33.33
CDX86519	Canola	extracellular	15.21	30.81
CDY01126	Canola	mitochondrion, plastid	31.42	29.86
CDX93011	Canola	plastid	31.17	29.55
CDX94817	Canola	mitochondrion, plastid	30.67	29.08

Protein Annotations

EnsemblPlants:CDY31769	EnsemblPlantsGene:GSBRNA2T00050424001	Gene3D:3.90.226.40	GO:A0A078H2X2	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PFAM:PF16113
ProteinID:CDY31769	ProteinID:CDY31769.1	SEG:seg	SUPFAM:SSF52096	UniParc:UPI0004EE2296	UniProt:A0A078H2X2
MapMan:50.3.1	:	:	:	:	:

Description

BnaA04g17050DBnaA04g17050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2X2]

Coordinates

chrLK032278:+:401751..404676

Molecular Weight (calculated)

44727.4 Da

IEP (calculated)

8.606

GRAVY (calculated)

-0.123

Length

401 amino acids

Sequence
(BLAST)

001: MGSEPHSQVL VEETSSVRIL TLNRPKHLNA LSLNMITRLL QLFLAYEEDP SVKLVILKGQ GRAFCAGGDV PAIVRDIRLG KWRRSADFMS LGYNLHYVMA
101: TYCKAQVSIL NGIVMGGGVG VCVHGRFRIA TENTVFAMPE TSLGIFPDVG ASYFLSRLPG FFGEYVGLTG ARLDGAEMLA CGLATHFVPS TRLTALEADL
201: CRVGSSDPVT YASTILDAYT QHPHPKQKSA CHRQIFNGNL CHQFLISINF SLCRLDVIDK CFSRRTVEEI ISALEREATH KPDDWISATI GAFKKASPAS
301: LKISLRSIRE GRLQGLGQCL IRENRMVAHM MKGDISKDFV EGCRAILIDK DRNPKWDPRR LEDMKDNMVD KYFKRVEEED GWEDLKLPPR KHLPASAIAK
401: L

Best Arabidopsis Sequence Match ( AT2G30650.1 )
(BLAST)

001: MASHSQVLVE EKSSVRILTF NRPKQLNALS FHMVSRLLQL FLAYEEDPSV KLVVLKGQGR AFSAGGDIPP IVRDILQGKL IRGAHYFKVG YTLNYVLSTY
101: RKPQVSILNG IVMGGGAGLS TNGRFRIATE NTVFAMPETA LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSIS LTALEAELYK
201: VGSSNQTFIS TILDAYAEYP HLNQHSSYHR LDVIDRCFSK RTVEEIFSAL EREVTQKPND WLLATIQALE KASPSCLKIS LRSIREGRLQ GVGQCLIREY
301: RMVCHVMKGD ISKDFVEGCR AVLIDKDRNP KWQPRRLEDV TDSMVDQYFE RVEDEEGWED LKFPPRNNLP ALAIAAKL

Arabidopsis Description

Probable 3-hydroxyisobutyryl-CoA hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEY5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.