Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032700.1-P | Field mustard | plastid | 98.69 | 88.89 |
| CDY01126 | Canola | mitochondrion, plastid | 98.43 | 88.86 |
| AT4G13360.1 | Thale cress | mitochondrion | 93.96 | 85.04 |
| Solyc07g022880.2.1 | Tomato | cytosol | 28.87 | 76.39 |
| CDX93011 | Canola | plastid | 83.46 | 75.18 |
| CDX94817 | Canola | mitochondrion, plastid | 82.94 | 74.7 |
| KRH60315 | Soybean | nucleus | 75.59 | 70.59 |
| KRH41609 | Soybean | nucleus | 74.8 | 69.85 |
| GSMUA_Achr6P00740_001 | Banana | cytosol | 68.24 | 68.97 |
| GSMUA_Achr7P08560_001 | Banana | cytosol | 67.98 | 68.34 |
| GSMUA_Achr7P13260_001 | Banana | cytosol | 63.78 | 64.97 |
| Solyc05g018410.1.1 | Tomato | plastid | 50.39 | 64.0 |
| VIT_11s0016g04290.t01 | Wine grape | mitochondrion | 75.33 | 63.64 |
| TraesCS7D01G352500.3 | Wheat | mitochondrion | 68.77 | 63.28 |
| TraesCS7A01G370500.3 | Wheat | mitochondrion, plastid | 69.03 | 62.47 |
| TraesCS7B01G257500.1 | Wheat | mitochondrion, plastid | 68.77 | 62.38 |
| KXG20277 | Sorghum | plastid | 69.03 | 61.59 |
| Os06t0594100-01 | Rice | mitochondrion | 69.03 | 60.6 |
| HORVU7Hr1G085310.1 | Barley | peroxisome | 65.88 | 55.9 |
| Zm00001d046456_P009 | Maize | plastid | 63.52 | 54.14 |
| CDY57769 | Canola | peroxisome | 35.7 | 36.46 |
| CDY55104 | Canola | cytosol | 35.7 | 36.17 |
| CDY45442 | Canola | mitochondrion | 29.4 | 33.84 |
| CDX86518 | Canola | cytosol | 33.86 | 33.68 |
| CDY45439 | Canola | plastid | 34.91 | 33.67 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 19.68 | 33.33 |
| CDY15584 | Canola | cytosol | 33.07 | 33.25 |
| CDY31775 | Canola | peroxisome | 33.33 | 33.16 |
| CDX97894 | Canola | peroxisome | 33.6 | 32.99 |
| CDY62818 | Canola | peroxisome | 34.65 | 32.92 |
| CDY31769 | Canola | peroxisome | 33.33 | 31.67 |
| CDX67831 | Canola | mitochondrion | 32.81 | 31.09 |
| CDY71268 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 12.07 | 30.87 |
| CDX98420 | Canola | mitochondrion | 32.55 | 30.85 |
| CDY15581 | Canola | cytosol | 22.05 | 30.77 |
| CDY23311 | Canola | mitochondrion | 33.07 | 30.73 |
| CDY39880 | Canola | mitochondrion | 32.81 | 30.49 |
| CDY15583 | Canola | cytosol | 28.87 | 29.81 |
| CDX86519 | Canola | extracellular | 15.49 | 29.8 |
| CDY72221 | Canola | mitochondrion | 16.01 | 29.33 |
Protein Annotations
| EnsemblPlants:CDY64934 | EnsemblPlantsGene:GSBRNA2T00043877001 | Gene3D:3.90.226.10 | GO:A0A078JE46 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003860 | GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF5 |
| PFAM:PF16113 | ProteinID:CDY64934 | ProteinID:CDY64934.1 | SUPFAM:SSF52096 | UniParc:UPI0004EF2211 | UniProt:A0A078JE46 |
| MapMan:50.3.1 | : | : | : | : | : |
Description
BnaCnng45560DBnaCnng45560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE46]
Coordinates
chrLK034603:+:52..2662
Molecular Weight (calculated)
41210.2 Da
IEP (calculated)
5.080
GRAVY (calculated)
-0.177
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAGGDEFV KGNVYPNGVA VITLDRTKAL NAMNLEMDLK YKSFLDEWES DPRVKCVIIE GSTPRAFCAG MDIKGVAAEI QKDKNTPLVQ KVFTAEYTLI
101: CAIAGYKKPY ISLMDGITMG FGLGLSGHGR YRVITERTVL AMPENGIGLF PDVGFSYIAA HSPGGGSVGA YLGLTGKRIS APSDALFVGL GTHYVPSEKL
201: ASLKEAILSA NLSADPNQDI QATLSKYSGN TESEAHLKSL LPQIESAFSS NKSVKETIEE LKNYQQSTEP AVVEWAKEAL KGLEKGAPFS LYLTQKYFSN
301: VACAKGKAEN ELATLNGVMK TEYRIALRSA LRGDFAEGVR AVLIDKDQNP KWNPASVEEV DENEVEALFK PLSSEVEELK V
101: CAIAGYKKPY ISLMDGITMG FGLGLSGHGR YRVITERTVL AMPENGIGLF PDVGFSYIAA HSPGGGSVGA YLGLTGKRIS APSDALFVGL GTHYVPSEKL
201: ASLKEAILSA NLSADPNQDI QATLSKYSGN TESEAHLKSL LPQIESAFSS NKSVKETIEE LKNYQQSTEP AVVEWAKEAL KGLEKGAPFS LYLTQKYFSN
301: VACAKGKAEN ELATLNGVMK TEYRIALRSA LRGDFAEGVR AVLIDKDQNP KWNPASVEEV DENEVEALFK PLSSEVEELK V
001: MIIIKTLSHR IFFPKFSQTF SSQFHQTLRF SISDRRKFSA MAGAGVDDFV KGNVFPNGVA LITLDRTKAL NAMNLDMDIK YKSFLDEWES DPRVKCVIVE
101: GSTSRAFCAG MDIKGVAAEI QKDKNTPLVQ KVFTAEYTLI CAIAAYKKPY ISLMDGITMG FGLGLSGHGR YRVITERTVL AMPENGIGLF PDVGFSYIAA
201: HSPGGGSVGA YLGLTGKRIS APSDALFVGL GTHYVPSEKL ASLKEAILSA NLSEDPNQDI QATLSKYSSN PESEAHLKSL LPHIESAFSS NKSIKETIEE
301: LKKYQQSTES SVVEWANEAL KGLEKGAPFS LYLTQKYFSN VACAKSKPEN ELATLNGVMK TEYRIALRSA LRGDFAEGVR AVLIDKDQNP KWNPTSIEEV
401: DENEVEALFK PLSPEVEELK V
101: GSTSRAFCAG MDIKGVAAEI QKDKNTPLVQ KVFTAEYTLI CAIAAYKKPY ISLMDGITMG FGLGLSGHGR YRVITERTVL AMPENGIGLF PDVGFSYIAA
201: HSPGGGSVGA YLGLTGKRIS APSDALFVGL GTHYVPSEKL ASLKEAILSA NLSEDPNQDI QATLSKYSSN PESEAHLKSL LPHIESAFSS NKSIKETIEE
301: LKKYQQSTES SVVEWANEAL KGLEKGAPFS LYLTQKYFSN VACAKSKPEN ELATLNGVMK TEYRIALRSA LRGDFAEGVR AVLIDKDQNP KWNPTSIEEV
401: DENEVEALFK PLSPEVEELK V
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9T0K7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.