CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64934	Canola	cytosol	88.86	98.43
Bra010664.1-P	Field mustard	cytosol	45.02	92.68
AT4G13360.1	Thale cress	mitochondrion	89.81	90.02
CDX93011	Canola	plastid	78.2	78.01
CDX94817	Canola	mitochondrion, plastid	77.96	77.78
Solyc07g022880.2.1	Tomato	cytosol	26.07	76.39
KRH60315	Soybean	nucleus	70.38	72.79
KRH41609	Soybean	nucleus	69.67	72.06
GSMUA_Achr6P00740_001	Banana	cytosol	61.37	68.7
GSMUA_Achr7P08560_001	Banana	cytosol	61.61	68.6
VIT_11s0016g04290.t01	Wine grape	mitochondrion	69.91	65.41
GSMUA_Achr7P13260_001	Banana	cytosol	57.35	64.71
TraesCS7D01G352500.3	Wheat	mitochondrion	63.27	64.49
Solyc05g018410.1.1	Tomato	plastid	45.73	64.33
TraesCS7A01G370500.3	Wheat	mitochondrion, plastid	63.74	63.9
TraesCS7B01G257500.1	Wheat	mitochondrion, plastid	63.51	63.81
KXG20277	Sorghum	plastid	63.98	63.23
Os06t0594100-01	Rice	mitochondrion	64.22	62.44
HORVU7Hr1G085310.1	Barley	peroxisome	61.14	57.46
Zm00001d046456_P009	Maize	plastid	58.77	55.48
CDY57769	Canola	peroxisome	32.23	36.46
CDY55104	Canola	cytosol	32.23	36.17
CDY45439	Canola	plastid	31.52	33.67
CDY45442	Canola	mitochondrion	26.3	33.53
CDX86518	Canola	cytosol	30.33	33.42
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	17.77	33.33
CDY31775	Canola	peroxisome	30.09	33.16
CDX97894	Canola	peroxisome	30.33	32.99
CDY15584	Canola	cytosol	29.62	32.98
CDY62818	Canola	peroxisome	31.04	32.67
CDY31769	Canola	peroxisome	29.86	31.42
CDX67831	Canola	mitochondrion	29.62	31.09
CDY23311	Canola	mitochondrion	30.09	30.98
CDX98420	Canola	mitochondrion	29.38	30.85
CDY39880	Canola	mitochondrion	29.86	30.73
CDY15581	Canola	cytosol	19.67	30.4
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	10.66	30.2
CDY15583	Canola	cytosol	25.83	29.54
CDY72221	Canola	mitochondrion	14.46	29.33
CDX86519	Canola	extracellular	13.74	29.29

Protein Annotations

EnsemblPlants:CDY01126	EnsemblPlantsGene:GSBRNA2T00111192001	Gene3D:3.90.226.10	GO:A0A078EJ35	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF5
PFAM:PF16113	ProteinID:CDY01126	ProteinID:CDY01126.1	SEG:seg	SUPFAM:SSF52096	UniParc:UPI0004EF44DC
MapMan:50.3.1	:	:	:	:	:

Description

BnaA04g06930D

Coordinates

chrLK031924:+:263919..266484

Molecular Weight (calculated)

45928.9 Da

IEP (calculated)

6.639

GRAVY (calculated)

-0.169

Length

422 amino acids

Sequence
(BLAST)

001: MIKTFALASS AHRILYPKYS STFSSHHILR FSLSDRRTFS AMAGAGGDEF VKGNVYPNGV AVITLDRTKA LNAMNLEMDL KYKSFLDEWE SDPRVKCVII
101: EGSTPRAFCA GMDIKGVAAE IQKDKNTPLV QKVFTAEYTL ICAIAGYKKP YISLMDGITM GFGLGLSGHG RYRVITERTV LAMPENGIGL FPDVGFSYIA
201: AHSPGGGSVG AYLGLTGKRI STPSDALFVG LGTHYVPSEK LASLKEAILS ANLSADPNQD IEAALSKYSG NTESEAHLKS LLPQIESAFS SNKSVKETIE
301: ELKKYQQSTE PSVVEWAKEA LKGLEKGAPF SLYLTQKYFS NVACAKGKAE NELATLNGVM KTEYRIALRS ALRGDFAEGV RAVLIDKDQN PKWNPASVEE
401: VDESEVEALF KPLSSEVEEL KV

Best Arabidopsis Sequence Match ( AT4G13360.1 )
(BLAST)

001: MIIIKTLSHR IFFPKFSQTF SSQFHQTLRF SISDRRKFSA MAGAGVDDFV KGNVFPNGVA LITLDRTKAL NAMNLDMDIK YKSFLDEWES DPRVKCVIVE
101: GSTSRAFCAG MDIKGVAAEI QKDKNTPLVQ KVFTAEYTLI CAIAAYKKPY ISLMDGITMG FGLGLSGHGR YRVITERTVL AMPENGIGLF PDVGFSYIAA
201: HSPGGGSVGA YLGLTGKRIS APSDALFVGL GTHYVPSEKL ASLKEAILSA NLSEDPNQDI QATLSKYSSN PESEAHLKSL LPHIESAFSS NKSIKETIEE
301: LKKYQQSTES SVVEWANEAL KGLEKGAPFS LYLTQKYFSN VACAKSKPEN ELATLNGVMK TEYRIALRSA LRGDFAEGVR AVLIDKDQNP KWNPTSIEEV
401: DENEVEALFK PLSPEVEELK V

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9T0K7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.