CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98420	Canola	mitochondrion	96.15	49.75
Bra003417.1-P	Field mustard	mitochondrion	95.67	49.75
CDX67831	Canola	mitochondrion	95.19	49.25
AT3G60510.3	Thale cress	mitochondrion	85.58	41.78
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	31.25	28.89
CDY23311	Canola	mitochondrion	49.52	25.12
CDY39880	Canola	mitochondrion	48.56	24.63
CDY57769	Canola	peroxisome	40.38	22.52
CDY55104	Canola	cytosol	40.38	22.34
CDY31769	Canola	peroxisome	38.94	20.2
CDY62818	Canola	peroxisome	37.98	19.7
CDX97894	Canola	peroxisome	36.06	19.33
CDY31775	Canola	peroxisome	35.58	19.32
CDY15584	Canola	cytosol	34.62	19.0
CDX86518	Canola	cytosol	34.13	18.54
CDY45439	Canola	plastid	34.62	18.23
CDY64934	Canola	cytosol	29.33	16.01
CDY15583	Canola	cytosol	26.44	14.91
CDX94817	Canola	mitochondrion, plastid	30.29	14.89
CDX93011	Canola	plastid	30.29	14.89
CDY45442	Canola	mitochondrion	23.56	14.8
CDY01126	Canola	mitochondrion, plastid	29.33	14.46
CDX86519	Canola	extracellular	12.98	13.64
CDY15581	Canola	cytosol	14.9	11.36
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	2.88	4.03

Protein Annotations

EnsemblPlants:CDY72221	EnsemblPlantsGene:GSBRNA2T00025802001	Gene3D:3.90.226.10	GO:A0A078K322	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF4
PFAM:PF16113	ProteinID:CDY72221	ProteinID:CDY72221.1	SUPFAM:SSF52096	UniParc:UPI0004EE61D9	UniProt:A0A078K322
MapMan:50.3.1	:	:	:	:	:

Description

BnaCnng76550DBnaCnng76550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K322]

Coordinates

chrLK049620:+:611..2052

Molecular Weight (calculated)

23192.2 Da

IEP (calculated)

9.911

GRAVY (calculated)

0.047

Length

208 amino acids

Sequence
(BLAST)

001: MHNANGFLTR VVRDKQLWRF GYRRSFCSLK VTPDDLDNQV LFEGSGCSRA AILNRPPALN ALTTHMGVRL HKLYKNWEED PNIGFVMMKG SGRAFCAGGD
101: IVSIYHLRKR GSPDAIREFF WTLYNFIYFL GTYLKPHVAI LNGVTMGGGA GVSIPGTFRV ATDRTIFATP ETVIGFHPDA GASFNLSHLP GRLGMLVICF
201: ELLRFTSL

Best Arabidopsis Sequence Match ( AT3G60510.2 )
(BLAST)

001: MHNAKGLLGR IVRDKLWRFG YRRSLCSLKL TSEDLDYQVL VEGSGCSRTA ILNRPPALNA LTTHMGYRLQ KLYKNWEEDP NIGFVMMKGS GRAFCAGGDI
101: VSLYHLRTRG SPDAIREFFS SLYSFIYLLG TYLKPHVAIL NGVTMGGGTG VSIPGTFRVA TDRTIFATPE TIIGFHPDAG ASFNLSHLPG RLGEYLGLTG
201: LKLSGAEMLA CGLATHYIRS EEVPVMEEQL KKLLTDDPSV VESCLEKCAE VAHPEKTGVI RRIDLLEKCF SHDTVEEIID SLEIEASRRK DTWCITTLRR
301: LKESSPLSLK VALRSLL

Arabidopsis Description

ATP-dependent caseinolytic (Clp) protease/crotonase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.