Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86519 | Canola | extracellular | 60.81 | 83.84 |
| Solyc07g043690.1.1 | Tomato | cytosol | 40.29 | 56.99 |
| CDX86518 | Canola | cytosol | 79.12 | 56.4 |
| CDY15584 | Canola | cytosol | 77.66 | 55.94 |
| CDY15583 | Canola | cytosol | 75.09 | 55.56 |
| AT1G06550.1 | Thale cress | cytosol | 78.02 | 55.04 |
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 54.58 | 52.65 |
| Solyc07g044740.1.1 | Tomato | cytosol | 23.08 | 48.46 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 55.31 | 45.35 |
| Solyc12g011160.1.1 | Tomato | cytosol | 62.27 | 44.27 |
| KRH46020 | Soybean | vacuole | 64.47 | 44.22 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 63.0 | 44.22 |
| PGSC0003DMT400054311 | Potato | cytosol | 25.64 | 44.03 |
| PGSC0003DMT400020300 | Potato | cytosol | 61.54 | 43.75 |
| KRG98957 | Soybean | nucleus | 64.1 | 43.64 |
| EES03617 | Sorghum | cytosol | 57.88 | 41.25 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 57.51 | 40.89 |
| Solyc07g044710.1.1 | Tomato | plastid | 57.14 | 39.59 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 55.31 | 39.22 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 55.31 | 39.22 |
| Os01t0752200-01 | Rice | plasma membrane | 55.31 | 38.82 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 54.95 | 38.46 |
| PGSC0003DMT400079108 | Potato | cytosol | 48.35 | 38.37 |
| PGSC0003DMT400057075 | Potato | cytosol, plastid | 56.04 | 38.25 |
| PGSC0003DMT400041136 | Potato | cytosol | 47.99 | 37.75 |
| Solyc07g043680.2.1 | Tomato | cytosol | 54.95 | 37.69 |
| CDY71268 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 20.51 | 37.58 |
| Solyc07g044720.1.1 | Tomato | plastid | 57.88 | 37.53 |
| Solyc06g054520.1.1 | Tomato | cytosol | 55.31 | 36.65 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 56.04 | 35.83 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 31.14 | 35.42 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 57.51 | 33.26 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 25.27 | 30.67 |
| CDY45442 | Canola | mitochondrion | 37.0 | 30.51 |
| CDY57769 | Canola | peroxisome | 37.36 | 27.35 |
| CDY55104 | Canola | cytosol | 37.36 | 27.13 |
| CDY23311 | Canola | mitochondrion | 39.19 | 26.1 |
| CDY39880 | Canola | mitochondrion | 38.83 | 25.85 |
| CDY62818 | Canola | peroxisome | 37.36 | 25.44 |
| CDY31775 | Canola | peroxisome | 35.53 | 25.33 |
| CDY45439 | Canola | plastid | 36.63 | 25.32 |
| CDX97894 | Canola | peroxisome | 35.9 | 25.26 |
| CDX67831 | Canola | mitochondrion | 37.0 | 25.12 |
| CDY31769 | Canola | peroxisome | 36.63 | 24.94 |
| CDX98420 | Canola | mitochondrion | 36.63 | 24.88 |
| CDY64934 | Canola | cytosol | 30.77 | 22.05 |
| CDX93011 | Canola | plastid | 30.77 | 19.86 |
| CDY01126 | Canola | mitochondrion, plastid | 30.4 | 19.67 |
| CDX94817 | Canola | mitochondrion, plastid | 30.4 | 19.62 |
| CDY72221 | Canola | mitochondrion | 11.36 | 14.9 |
Protein Annotations
| EnsemblPlants:CDY15581 | EnsemblPlantsGene:GSBRNA2T00089762001 | Gene3D:3.90.226.40 | GO:A0A078FR42 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003860 | GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 |
| PFAM:PF16113 | ProteinID:CDY15581 | ProteinID:CDY15581.1 | SEG:seg | SUPFAM:SSF52096 | UniParc:UPI0004EEED93 |
| UniProt:A0A078FR42 | MapMan:50.3.1 | : | : | : | : |
Description
BnaA08g28650DBnaA08g28650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FR42]
Coordinates
chrLK032055:-:609583..611392
Molecular Weight (calculated)
30368.2 Da
IEP (calculated)
4.573
GRAVY (calculated)
-0.213
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLGGGGAPL TLPAKFSVVT EYTDFATPEA YFGFHIECGF SYIHSRLPGH LGEFLALTGA ILNGKELVAL GMATHFVPLD KVWDLMPRLA RLDSGDTDVV
101: RSTIEEFSEK VDLDEDSILN KQSIIDACFS KESVKQIIQA FEAEGSKEGN EWITPILKRL KESSPTALKI NLRSIREARN QTLGDCLKKE FRITVNIMRS
201: TISIDAFEGV RALTIAKDNC PRWNPATLDE VDDEKINLVF LPLEDDLELR IPETEENKWE GKAETSGFAS VRG
101: RSTIEEFSEK VDLDEDSILN KQSIIDACFS KESVKQIIQA FEAEGSKEGN EWITPILKRL KESSPTALKI NLRSIREARN QTLGDCLKKE FRITVNIMRS
201: TISIDAFEGV RALTIAKDNC PRWNPATLDE VDDEKINLVF LPLEDDLELR IPETEENKWE GKAETSGFAS VRG
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.