Factsheet for PGSC0003DMT400057075

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041136	Potato	cytosol	74.5	85.88
PGSC0003DMT400054311	Potato	cytosol	33.75	84.91
Solyc07g043680.2.1	Tomato	cytosol	84.25	84.67
PGSC0003DMT400069137	Potato	cytosol, mitochondrion	55.5	78.45
PGSC0003DMT400065713	Potato	cytosol, mitochondrion	41.0	68.33
PGSC0003DMT400079108	Potato	cytosol	54.5	63.37
PGSC0003DMT400020300	Potato	cytosol	60.5	63.02
VIT_12s0028g00590.t01	Wine grape	cytosol	58.0	59.64
KRH46020	Soybean	vacuole	58.25	58.54
Bra030657.1-P	Field mustard	cytosol	54.75	58.24
KRG98957	Soybean	nucleus	58.0	57.86
CDY15584	Canola	cytosol	54.5	57.52
CDX86518	Canola	cytosol	55.0	57.44
TraesCS3D01G290900.1	Wheat	cytosol	47.75	57.36
EES03617	Sorghum	cytosol	54.25	56.66
Zm00001d043490_P001	Maize	cytosol, extracellular	54.25	56.51
AT1G06550.1	Thale cress	cytosol	54.5	56.33
CDY15581	Canola	cytosol	38.25	56.04
TraesCS3A01G291100.1	Wheat	cytosol	53.75	55.84
TraesCS3B01G325800.1	Wheat	cytosol	53.5	55.58
HORVU3Hr1G072100.2	Barley	cytosol	52.5	53.85
Os01t0752200-01	Rice	plasma membrane	52.0	53.47
CDX86519	Canola	extracellular	25.5	51.52
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	28.25	50.22
Bra030656.1-P	Field mustard	cytosol	45.25	50.14
CDY15583	Canola	cytosol	46.0	49.86
GSMUA_Achr9P06670_001	Banana	plastid	55.75	47.25
PGSC0003DMT400004567	Potato	extracellular	14.75	44.7
PGSC0003DMT400066411	Potato	nucleus	15.5	42.47
Bra030655.1-P	Field mustard	extracellular	19.0	42.46
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	26.5	39.85
PGSC0003DMT400004521	Potato	cytosol	23.25	39.74
PGSC0003DMT400000054	Potato	cytosol	38.0	39.58
PGSC0003DMT400004585	Potato	extracellular	26.0	38.95
PGSC0003DMT400066409	Potato	cytosol	13.5	38.85
PGSC0003DMT400043000	Potato	cytosol	18.25	37.44
PGSC0003DMT400066419	Potato	cytosol	22.0	36.67
PGSC0003DMT400066414	Potato	cytosol	15.25	35.67
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	5.75	33.82

Protein Annotations

EnsemblPlants:PGSC0003DMT400057075	EnsemblPlantsGene:PGSC0003DMG400022177	EntrezGene:102588338	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF2
PFAM:PF16113	PGSC:PGSC0003DMG400022177	RefSeq:XP_006346151.1	SUPFAM:SSF52096	UniParc:UPI000296E3F0	UniProt:M1C0C2
MapMan:50.3.1	:	:	:	:	:

Description

Enoyl-CoA hydratase, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400022177]

Coordinates

chr7:-:55425007..55430287

Molecular Weight (calculated)

45341.7 Da

IEP (calculated)

5.933

GRAVY (calculated)

-0.318

Length

400 amino acids

Sequence
(BLAST)

001: MGITSLPSSI VTSLMPPEVM KQNREDVIAK EIGHGRVLTL NRPDHLNSIS EKMVLMLGQK FEKYEKDENV EFVIVKGAGR TFSAGGELKR LYDGRNTRDS
101: CLEFGYRLYW FCYQLQTYKK PHIVLAHGMS MGGGVGLMAP MKFSVVTERT FCSIPEANLG YHPDCGLSYI LPRLPGRLGE YLGLTGANLK GKEVVAAGLA
201: THFVPSQKLF QLEKSLLSIN NGEEDTIRSV IDEFSTNVQI DERSVLSKLS IIDDCFSRET VEEILDSFET EACKKGNDWI MPVLKSIKKA SPIGLKITLR
301: SIREGRTQTL SECLRKEFRI TMNTLRTIIS DDLYEGIRAA IIDKDKSPKW NPSTLDKVHD EQLDLIFKPF EEHDLELQIP INEEEYCRWE GKYESSSYCL

Best Arabidopsis Sequence Match ( AT1G06550.1 )
(BLAST)

001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.