Factsheet for PGSC0003DMT400054311

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
plasma membrane 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g043690.1.1	Tomato	cytosol	52.83	43.52
PGSC0003DMT400069137	Potato	cytosol, mitochondrion	61.64	34.63
PGSC0003DMT400041136	Potato	cytosol	74.21	34.01
PGSC0003DMT400057075	Potato	cytosol, plastid	84.91	33.75
PGSC0003DMT400004567	Potato	extracellular	22.64	27.27
CDY15581	Canola	cytosol	44.03	25.64
PGSC0003DMT400020300	Potato	cytosol	59.75	24.74
TraesCS3D01G290900.1	Wheat	cytosol	51.57	24.62
EES03617	Sorghum	cytosol	57.23	23.76
TraesCS3B01G325800.1	Wheat	cytosol	57.23	23.64
Zm00001d043490_P001	Maize	cytosol, extracellular	56.6	23.44
TraesCS3A01G291100.1	Wheat	cytosol	56.6	23.38
HORVU3Hr1G072100.2	Barley	cytosol	57.23	23.33
PGSC0003DMT400066409	Potato	cytosol	20.13	23.02
PGSC0003DMT400004585	Potato	extracellular	37.74	22.47
KRH46020	Soybean	vacuole	55.97	22.36
VIT_12s0028g00590.t01	Wine grape	cytosol	54.09	22.11
Os01t0752200-01	Rice	plasma membrane	53.46	21.85
Bra030657.1-P	Field mustard	cytosol	51.57	21.81
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	36.48	21.8
KRG98957	Soybean	nucleus	54.72	21.7
CDX86518	Canola	cytosol	52.2	21.67
CDY15584	Canola	cytosol	51.57	21.64
PGSC0003DMT400079108	Potato	cytosol	46.54	21.51
CDX86519	Canola	extracellular	26.42	21.21
AT1G06550.1	Thale cress	cytosol	51.57	21.19
CDY15583	Canola	cytosol	48.43	20.87
Bra030656.1-P	Field mustard	cytosol	46.54	20.5
PGSC0003DMT400065713	Potato	cytosol, mitochondrion	29.56	19.58
PGSC0003DMT400004521	Potato	cytosol	28.3	19.23
PGSC0003DMT400000054	Potato	cytosol	45.91	19.01
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	26.42	18.67
GSMUA_Achr9P06670_001	Banana	plastid	53.46	18.01
PGSC0003DMT400066419	Potato	cytosol	24.53	16.25
PGSC0003DMT400043000	Potato	cytosol	18.87	15.38
PGSC0003DMT400066411	Potato	nucleus	13.84	15.07
PGSC0003DMT400066414	Potato	cytosol	15.09	14.04
Bra030655.1-P	Field mustard	extracellular	9.43	8.38
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400054311	EnsemblPlantsGene:PGSC0003DMG400021075	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860
GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	ncoils:Coil	PANTHER:PTHR43176	PANTHER:PTHR43176:SF2
PFAM:PF16113	PGSC:PGSC0003DMG400021075	SUPFAM:SSF52096	UniParc:UPI000295B0FA	UniProt:M1BW36	MapMan:35.1

Description

Enoyl-CoA hydratase, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400021075]

Coordinates

chr7:+:42241943..42243172

Molecular Weight (calculated)

17676.4 Da

IEP (calculated)

5.058

GRAVY (calculated)

-0.043

Length

159 amino acids

Sequence
(BLAST)

001: MLAQKLVKYE KDDNAEFIII KGITQTVAYH TYILSRLPGR LGEYLGLTGV KLKGKEVVAA GLATHFVPSH KLFQLEKSLL SINNGGEEDT IFRSVIDEFS
101: TIVQIDETSV LSKLSIIDDC FSRETVEEIL DSFEAEAGKK ENDWIMPVLK SIKKASPIG

Best Arabidopsis Sequence Match ( AT1G06550.1 )
(BLAST)

001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.