Factsheet for Zm00001d043490_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03617	Sorghum	cytosol	96.35	96.61
Os01t0752200-01	Rice	plasma membrane	89.58	88.43
TraesCS3B01G325800.1	Wheat	cytosol	85.42	85.19
TraesCS3A01G291100.1	Wheat	cytosol	85.42	85.19
TraesCS3D01G290900.1	Wheat	cytosol	73.18	84.38
HORVU3Hr1G072100.2	Barley	cytosol	84.64	83.33
Solyc12g011160.1.1	Tomato	cytosol	67.97	67.97
PGSC0003DMT400020300	Potato	cytosol	67.71	67.71
Bra030657.1-P	Field mustard	cytosol	65.1	66.49
CDY15584	Canola	cytosol	64.58	65.44
CDX86518	Canola	cytosol	65.1	65.27
AT1G06550.1	Thale cress	cytosol	65.62	65.12
VIT_12s0028g00590.t01	Wine grape	cytosol	65.89	65.04
KRH46020	Soybean	vacuole	64.84	62.56
KRG98957	Soybean	nucleus	65.1	62.34
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	35.94	61.33
PGSC0003DMT400069137	Potato	cytosol, mitochondrion	43.75	59.36
GSMUA_Achr9P06670_001	Banana	plastid	71.61	58.26
Solyc07g043690.1.1	Tomato	cytosol	29.17	58.03
CDY15581	Canola	cytosol	40.89	57.51
PGSC0003DMT400079108	Potato	cytosol	51.3	57.27
Bra030656.1-P	Field mustard	cytosol	53.39	56.79
PGSC0003DMT400041136	Potato	cytosol	51.3	56.77
CDY15583	Canola	cytosol	54.43	56.64
PGSC0003DMT400054311	Potato	cytosol	23.44	56.6
Solyc06g054520.1.1	Tomato	cytosol	60.16	56.07
Solyc07g044710.1.1	Tomato	plastid	57.29	55.84
Solyc07g043680.2.1	Tomato	cytosol	57.29	55.28
PGSC0003DMT400057075	Potato	cytosol, plastid	56.51	54.25
Solyc07g044720.1.1	Tomato	plastid	57.81	52.73
Solyc07g044730.2.1	Tomato	endoplasmic reticulum, vacuole	57.81	51.99
CDX86519	Canola	extracellular	26.3	51.01
Solyc07g044740.1.1	Tomato	cytosol	16.67	49.23
PGSC0003DMT400065713	Potato	cytosol, mitochondrion	29.69	47.5
Zm00001d007726_P001	Maize	peroxisome	26.82	42.04
Zm00001d023779_P001	Maize	extracellular	40.36	40.16
Zm00001d007746_P002	Maize	peroxisome	19.79	40.0
Zm00001d021132_P004	Maize	extracellular	39.84	37.87
Zm00001d029860_P001	Maize	plasma membrane	39.32	37.19
Bra030655.1-P	Field mustard	extracellular	17.19	36.87
Zm00001d007732_P002	Maize	extracellular	24.74	33.33
Zm00001d007740_P001	Maize	peroxisome	32.55	33.16
Zm00001d007728_P001	Maize	cytosol	9.64	26.06
Zm00001d046456_P009	Maize	plastid	28.91	24.83

Protein Annotations

EntrezGene:100283920	Gene3D:3.90.226.40	MapMan:50.3.1	UniProt:B6TN48	EMBL:BT064324	InterPro:ClpP/crotonase-like_dom_sf
EMBL:EU966413	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860	GO:GO:0008150	GO:GO:0009628
GO:GO:0016787	GO:GO:0080167	InterPro:HIBYL-CoA-H	ProteinID:ONM38242.1	PFAM:PF16113	PANTHER:PTHR43176
PANTHER:PTHR43176:SF2	SUPFAM:SSF52096	TMHMM:TMhelix	UniParc:UPI000182DE13	EnsemblPlantsGene:Zm00001d043490	EnsemblPlants:Zm00001d043490_P001
EnsemblPlants:Zm00001d043490_T001	SEG:seg	:	:	:	:

Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5

Coordinates

chr3:-:201674942..201679628

Molecular Weight (calculated)

42879.1 Da

IEP (calculated)

5.225

GRAVY (calculated)

-0.260

Length

384 amino acids

Sequence
(BLAST)

001: MAQQQTNPEE VVLGQEVGAA RVATLNRPRQ LNGISDRVVY LLAQFLEKWE KDENAKFVIF KGAGRAFSAG GDLKMFYEGK SNDSCLEVVY RMYWLCYHIH
101: TYKKTMVALV NGLVMGGGAA MVAPLKFAVV TEKTIFATPE ASVGLHTDCS FSYIHSRLPG YLGEYLALTG ARLNAKEMIS AGLATHFVSS EKLEELEKRL
201: LDLDTGAESA VRAVIEEFST DVQTDEDSIL NKLSTINKCF SAETVEDIIK AFESEASIDG NQWIAPVLKG LRRSSPTALK ITLRSIREGR KQSLPECLTK
301: EFRLTMNILR SVVNGDVYEG IRALSIDKDN APKWNPTTLE EVKYEDIDRL FQPFSPELEL QVPSDDSNRW SGKYENTVYG RASQ

Best Arabidopsis Sequence Match ( AT1G06550.1 )
(BLAST)

001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.