Factsheet for PGSC0003DMT400020300

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g011160.1.1	Tomato	cytosol	96.09	96.09
Bra030657.1-P	Field mustard	cytosol	70.83	72.34
VIT_12s0028g00590.t01	Wine grape	cytosol	72.92	71.98
CDX86518	Canola	cytosol	71.61	71.8
CDY15584	Canola	cytosol	69.53	70.45
AT1G06550.1	Thale cress	cytosol	69.27	68.73
PGSC0003DMT400069137	Potato	cytosol, mitochondrion	50.26	68.2
EES03617	Sorghum	cytosol	67.97	68.15
Zm00001d043490_P001	Maize	cytosol, extracellular	67.71	67.71
PGSC0003DMT400079108	Potato	cytosol	60.16	67.15
KRG98957	Soybean	nucleus	70.05	67.08
KRH46020	Soybean	vacuole	69.01	66.58
Os01t0752200-01	Rice	plasma membrane	67.45	66.58
TraesCS3B01G325800.1	Wheat	cytosol	66.67	66.49
TraesCS3A01G291100.1	Wheat	cytosol	66.67	66.49
TraesCS3D01G290900.1	Wheat	cytosol	57.55	66.37
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	38.28	65.33
HORVU3Hr1G072100.2	Barley	cytosol	65.62	64.62
PGSC0003DMT400041136	Potato	cytosol	56.25	62.25
CDY15581	Canola	cytosol	43.75	61.54
PGSC0003DMT400057075	Potato	cytosol, plastid	63.02	60.5
Bra030656.1-P	Field mustard	cytosol	56.77	60.39
CDY15583	Canola	cytosol	57.81	60.16
PGSC0003DMT400054311	Potato	cytosol	24.74	59.75
PGSC0003DMT400065713	Potato	cytosol, mitochondrion	34.9	55.83
GSMUA_Achr9P06670_001	Banana	plastid	66.67	54.24
CDX86519	Canola	extracellular	27.34	53.03
PGSC0003DMT400004567	Potato	extracellular	16.41	47.73
PGSC0003DMT400000054	Potato	cytosol	42.71	42.71
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	29.17	42.11
Bra030655.1-P	Field mustard	extracellular	19.27	41.34
PGSC0003DMT400066411	Potato	nucleus	15.36	40.41
PGSC0003DMT400066409	Potato	cytosol	14.58	40.29
PGSC0003DMT400004521	Potato	cytosol	24.22	39.74
PGSC0003DMT400066419	Potato	cytosol	23.96	38.33
PGSC0003DMT400004585	Potato	extracellular	26.56	38.2
PGSC0003DMT400066414	Potato	cytosol	16.93	38.01
PGSC0003DMT400043000	Potato	cytosol	19.01	37.44
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	6.51	36.76

Protein Annotations

EnsemblPlants:PGSC0003DMT400020300	EnsemblPlantsGene:PGSC0003DMG400007849	EntrezGene:102592236	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF2
PFAM:PF16113	PGSC:PGSC0003DMG400007849	RefSeq:XP_006350008.1	SEG:seg	SUPFAM:SSF52096	UniParc:UPI000294F203
UniProt:M1AD94	MapMan:50.3.1	:	:	:	:

Description

Enoyl-CoA hydratase, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400007849]

Coordinates

chr12:-:1195960..1201552

Molecular Weight (calculated)

42915.3 Da

IEP (calculated)

4.980

GRAVY (calculated)

-0.302

Length

384 amino acids

Sequence
(BLAST)

001: MAQETVNLEQ EVVLVEELGN VRVVTLNNPK QLNIISPKVV EPLAANLEKW EEDEKAKLVI IKGAGRAFSA GGDLKMFYNG RNSKDSCLEV VYRMYWLCNH
101: IHTYKKTMVA LVHGISMGGG ASLMAPMKFS VVTEKTVFST PEASIGFHTD CGFSYMLSRL PGRLGEYLGL TGARLNGKEL IAAGLATHFV PLEKLPELEK
201: HLLSLNTGDE DAVGFAIKEF STDVQIDEES ILKKQSIIDE CFSKDSVADI ISSFETEAGK EGNGWIVPVL KGLKRSSPTG LKITLRSIRE GRKQTLSECL
301: KKEFRITIHT LRARISGDVY EGIRALTIDK DNSPKWDPST LENVEDEQVN LVFEPFEEDF ELKVSENEQD RWDGKYEDSA YCHQ

Best Arabidopsis Sequence Match ( AT1G06550.1 )
(BLAST)

001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.