Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G291100.1 | Wheat | cytosol | 93.59 | 94.81 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 93.59 | 94.81 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 80.77 | 94.59 |
| Os01t0752200-01 | Rice | plasma membrane | 85.9 | 86.12 |
| EES03617 | Sorghum | cytosol | 84.1 | 85.64 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 83.33 | 84.64 |
| Solyc12g011160.1.1 | Tomato | cytosol | 65.64 | 66.67 |
| Bra030657.1-P | Field mustard | cytosol | 63.59 | 65.96 |
| PGSC0003DMT400020300 | Potato | cytosol | 64.62 | 65.62 |
| CDX86518 | Canola | cytosol | 63.85 | 65.01 |
| CDY15584 | Canola | cytosol | 62.82 | 64.64 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 64.36 | 64.52 |
| AT1G06550.1 | Thale cress | cytosol | 62.56 | 63.05 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 36.15 | 62.67 |
| KRH46020 | Soybean | vacuole | 63.33 | 62.06 |
| KRG98957 | Soybean | nucleus | 63.33 | 61.6 |
| PGSC0003DMT400054311 | Potato | cytosol | 23.33 | 57.23 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 68.97 | 56.99 |
| Solyc07g043690.1.1 | Tomato | cytosol | 27.95 | 56.48 |
| Bra030656.1-P | Field mustard | cytosol | 51.79 | 55.96 |
| PGSC0003DMT400079108 | Potato | cytosol | 49.23 | 55.81 |
| Solyc06g054520.1.1 | Tomato | cytosol | 58.46 | 55.34 |
| PGSC0003DMT400041136 | Potato | cytosol | 49.23 | 55.33 |
| CDY15583 | Canola | cytosol | 52.31 | 55.28 |
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 40.0 | 55.12 |
| CDY15581 | Canola | cytosol | 38.46 | 54.95 |
| Solyc07g043680.2.1 | Tomato | cytosol | 55.13 | 54.02 |
| PGSC0003DMT400057075 | Potato | cytosol, plastid | 53.85 | 52.5 |
| Solyc07g044710.1.1 | Tomato | plastid | 52.82 | 52.28 |
| CDX86519 | Canola | extracellular | 25.9 | 51.01 |
| Solyc07g044720.1.1 | Tomato | plastid | 53.33 | 49.41 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 53.85 | 49.18 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 27.69 | 45.0 |
| Solyc07g044740.1.1 | Tomato | cytosol | 14.36 | 43.08 |
| Bra030655.1-P | Field mustard | extracellular | 16.92 | 36.87 |
| HORVU1Hr1G049960.6 | Barley | mitochondrion | 36.92 | 34.12 |
| HORVU7Hr1G085310.1 | Barley | peroxisome | 25.13 | 21.83 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G072100.2 | EnsemblPlantsGene:HORVU3Hr1G072100 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0016787 | GO:GO:0080167 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H |
| PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 | SEG:seg | SUPFAM:SSF52096 | UniParc:UPI000B46650A |
| UniProt:A0A287LLH5 | MapMan:50.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:543867982..543872037
Molecular Weight (calculated)
43218.6 Da
IEP (calculated)
5.217
GRAVY (calculated)
-0.221
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: QLTGGDDAGI RLSAQVVLGQ EINGARVVTL NRPRQLNGIN DRVVYLLAQL LEKWEKDDDA KLVIFKGAGR AFSAGGDLKM FYEGRSSDDS CLEVVYRMYW
101: LCYHIHTYKK TTVALVNGLV MGGGAAMVAP LKFAVVTEKT VFATPEASVG LHTDCSFSYI HSRLPGYLGE YLALTGARLN AKEMIAAGLA THFVLSEKLE
201: ELEKQLLNLN AGDESAVRAV IEEFSTDVQL DQESILNKLP TIDKCFSAET VEEILKALDS EVSIDGNQWI APVLKSMRRS SPTGLKITLR SVREGRKQSL
301: QECLKKEFGL TMNILRSVVT GDVYEGIRAL SIDKDNAPKW SPATIEEVKN EDIDRVFEPF SSEHELQVPS DDSNRWSGKY EHTVYAKSSQ
101: LCYHIHTYKK TTVALVNGLV MGGGAAMVAP LKFAVVTEKT VFATPEASVG LHTDCSFSYI HSRLPGYLGE YLALTGARLN AKEMIAAGLA THFVLSEKLE
201: ELEKQLLNLN AGDESAVRAV IEEFSTDVQL DQESILNKLP TIDKCFSAET VEEILKALDS EVSIDGNQWI APVLKSMRRS SPTGLKITLR SVREGRKQSL
301: QECLKKEFGL TMNILRSVVT GDVYEGIRAL SIDKDNAPKW SPATIEEVKN EDIDRVFEPF SSEHELQVPS DDSNRWSGKY EHTVYAKSSQ
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.