CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	peroxisome
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043490_P001	Maize	cytosol, extracellular	96.61	96.35
Os01t0752200-01	Rice	plasma membrane	90.08	88.69
TraesCS3A01G291100.1	Wheat	cytosol	86.42	85.97
TraesCS3B01G325800.1	Wheat	cytosol	85.9	85.45
TraesCS3D01G290900.1	Wheat	cytosol	73.37	84.38
HORVU3Hr1G072100.2	Barley	cytosol	85.64	84.1
Solyc12g011160.1.1	Tomato	cytosol	68.93	68.75
PGSC0003DMT400020300	Potato	cytosol	68.15	67.97
Bra030657.1-P	Field mustard	cytosol	65.54	66.76
CDY15584	Canola	cytosol	65.01	65.7
CDX86518	Canola	cytosol	65.54	65.54
AT1G06550.1	Thale cress	cytosol	66.06	65.37
VIT_12s0028g00590.t01	Wine grape	cytosol	66.32	65.3
KRH46020	Soybean	vacuole	65.54	63.07
KRG98957	Soybean	nucleus	65.54	62.59
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	36.29	61.78
PGSC0003DMT400069137	Potato	cytosol, mitochondrion	43.86	59.36
GSMUA_Achr9P06670_001	Banana	plastid	71.54	58.05
Solyc07g043690.1.1	Tomato	cytosol	29.24	58.03
CDY15581	Canola	cytosol	41.25	57.88
PGSC0003DMT400079108	Potato	cytosol	51.44	57.27
PGSC0003DMT400054311	Potato	cytosol	23.76	57.23
Bra030656.1-P	Field mustard	cytosol	53.79	57.06
CDY15583	Canola	cytosol	54.83	56.91
PGSC0003DMT400041136	Potato	cytosol	51.44	56.77
Solyc06g054520.1.1	Tomato	cytosol	60.84	56.55
Solyc07g044710.1.1	Tomato	plastid	57.18	55.58
Solyc07g043680.2.1	Tomato	cytosol	56.92	54.77
PGSC0003DMT400057075	Potato	cytosol, plastid	56.66	54.25
Solyc07g044720.1.1	Tomato	plastid	57.7	52.49
Solyc07g044730.2.1	Tomato	endoplasmic reticulum, vacuole	57.7	51.76
CDX86519	Canola	extracellular	26.37	51.01
Solyc07g044740.1.1	Tomato	cytosol	16.71	49.23
PGSC0003DMT400065713	Potato	cytosol, mitochondrion	29.24	46.67
EER91893	Sorghum	cytosol	40.99	40.67
KXG29172	Sorghum	peroxisome	39.43	39.02
OQU84058	Sorghum	mitochondrion	39.95	37.32
Bra030655.1-P	Field mustard	extracellular	17.23	36.87
EER91964	Sorghum	mitochondrion	38.9	36.7
KXG20277	Sorghum	plastid	30.29	27.17

Protein Annotations

Gene3D:3.90.226.40	MapMan:50.3.1	EntrezGene:8072081	UniProt:C5XK53	InterPro:ClpP/crotonase-like_dom_sf	EnsemblPlants:EES03617
ProteinID:EES03617	ProteinID:EES03617.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860	GO:GO:0008150
GO:GO:0009628	GO:GO:0016787	GO:GO:0080167	InterPro:HIBYL-CoA-H	PFAM:PF16113	PANTHER:PTHR43176
PANTHER:PTHR43176:SF2	EnsemblPlantsGene:SORBI_3003G297400	SUPFAM:SSF52096	unigene:Sbi.15641	TMHMM:TMhelix	UniParc:UPI0001A84C84
RefSeq:XP_002458497.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:62928380..62932949

Molecular Weight (calculated)

42750.9 Da

IEP (calculated)

5.234

GRAVY (calculated)

-0.289

Length

383 amino acids

Sequence
(BLAST)

001: MAQQQTNPEE VVLGQEAGGA RVITLNRPRQ LNGISDRVVY LLAQFLEKWE KDENAKLVIF KGAGRAFSAG GDLKMFYEGK SNDSCLEVVY RMYWLCYHIH
101: TYKKTTVALV NGLVMGGGAA MVAPLKFAVV TEKTIFATPE ASVGLHTDCS FSYIHSRLPG YLGEYLALTG ARLNAKEMIS AGLATHFVSS EKLEELEKRL
201: LDLDTGEESA VRAVIEEFST DVQPDEDSIL NKLSIINKCF SAETVEDIIK AFESEASIDG NQWIAPVLKG LRRSSPTALK ITLRSIREGR RQSLPECLTK
301: EFRLTMNILR SVVNGDVYEG IRALSIDKDN APKWNPTTLE EVKNEDIDRV FQPFSSEREL QVPSDDSNRW SGKYENTVYG RAS

Best Arabidopsis Sequence Match ( AT1G06550.1 )
(BLAST)

001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.