Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g043690.1.1 | Tomato | cytosol | 43.97 | 90.67 |
| PGSC0003DMT400041136 | Potato | cytosol | 78.89 | 90.49 |
| PGSC0003DMT400057075 | Potato | cytosol, plastid | 84.67 | 84.25 |
| Solyc07g044710.1.1 | Tomato | plastid | 72.11 | 72.84 |
| Solyc07g044720.1.1 | Tomato | plastid | 73.37 | 69.36 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 73.87 | 68.85 |
| Solyc07g044740.1.1 | Tomato | cytosol | 21.61 | 66.15 |
| Solyc12g011160.1.1 | Tomato | cytosol | 61.81 | 64.06 |
| Solyc06g054520.1.1 | Tomato | cytosol | 62.81 | 60.68 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 58.04 | 59.38 |
| Bra030657.1-P | Field mustard | cytosol | 56.03 | 59.31 |
| CDX86518 | Canola | cytosol | 56.78 | 59.01 |
| KRH46020 | Soybean | vacuole | 58.54 | 58.54 |
| AT1G06550.1 | Thale cress | cytosol | 56.53 | 58.14 |
| CDY15584 | Canola | cytosol | 55.28 | 58.05 |
| KRG98957 | Soybean | nucleus | 58.29 | 57.86 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 47.99 | 57.36 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 55.28 | 57.29 |
| EES03617 | Sorghum | cytosol | 54.77 | 56.92 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 54.77 | 56.62 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 54.77 | 56.62 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 54.02 | 55.13 |
| CDY15581 | Canola | cytosol | 37.69 | 54.95 |
| Os01t0752200-01 | Rice | plasma membrane | 53.02 | 54.24 |
| Bra030656.1-P | Field mustard | cytosol | 47.49 | 52.35 |
| CDY15583 | Canola | cytosol | 48.24 | 52.03 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 29.15 | 51.56 |
| CDX86519 | Canola | extracellular | 25.13 | 50.51 |
| Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 11.06 | 49.44 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 56.28 | 47.46 |
| Solyc05g032680.2.1 | Tomato | mitochondrion | 12.31 | 43.36 |
| Bra030655.1-P | Field mustard | extracellular | 18.59 | 41.34 |
| Solyc01g080930.2.1 | Tomato | cytosol | 39.7 | 41.25 |
| Solyc01g094090.2.1 | Tomato | cytosol | 33.92 | 41.03 |
| Solyc01g108800.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 38.44 | 40.37 |
| Solyc01g090700.2.1 | Tomato | mitochondrion | 37.19 | 36.63 |
| Solyc10g085630.1.1 | Tomato | mitochondrion | 36.68 | 35.61 |
| Solyc05g018410.1.1 | Tomato | plastid | 21.11 | 28.0 |
| Solyc01g108790.1.1 | Tomato | nucleus | 12.06 | 27.27 |
| Solyc07g022880.2.1 | Tomato | cytosol | 8.54 | 23.61 |
Protein Annotations
| EnsemblPlants:Solyc07g043680.2.1 | EnsemblPlantsGene:Solyc07g043680.2 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 |
| SUPFAM:SSF52096 | UniParc:UPI000276C5E4 | UniProt:K4CEM5 | MapMan:50.3.1 | : | : |
Description
No Description!
Coordinates
chr7:+:57645784..57648294
Molecular Weight (calculated)
44968.1 Da
IEP (calculated)
6.928
GRAVY (calculated)
-0.341
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MGITSLPSTI TVPSEVMKQN REVVIAEEIG RGRVLTLNRP NNLNYISENV ALTVGQKLEK YEKDDNAKFV ILKGAGRTFC AGGDLKRIYD ARDSCLEDIY
101: RVYWICYHIH TYKKPHIALV HGMSMGGGVG FMAPMKYSVV TEKAFCSTPE ANLGYHPDCG LSYILSRLPG RLGEYLGLTG AKLKGKEVVA AGLATHFVPS
201: HKLFQLEKSL LSINNADQED TIRSLIDEFS TNVQIDERSV LSKLSVIDDC FSRETVEEIL DSFEAEAGKK GNDWIMPVLK SIKKASPIGL KITLRSIREG
301: RTQTLSECLR KEFRITINTL RTIISDDFYE GMRAAVIDKD KSPKWNPSTL DKVRDEQLDL IFKPFDEHDL ELQIPINEEE YYRWGGKYEN SGYCLRTK
101: RVYWICYHIH TYKKPHIALV HGMSMGGGVG FMAPMKYSVV TEKAFCSTPE ANLGYHPDCG LSYILSRLPG RLGEYLGLTG AKLKGKEVVA AGLATHFVPS
201: HKLFQLEKSL LSINNADQED TIRSLIDEFS TNVQIDERSV LSKLSVIDDC FSRETVEEIL DSFEAEAGKK GNDWIMPVLK SIKKASPIGL KITLRSIREG
301: RTQTLSECLR KEFRITINTL RTIISDDFYE GMRAAVIDKD KSPKWNPSTL DKVRDEQLDL IFKPFDEHDL ELQIPINEEE YYRWGGKYEN SGYCLRTK
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.