Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g044710.1.1 | Tomato | plastid | 88.84 | 94.92 |
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 62.0 | 92.23 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 48.69 | 85.42 |
| Solyc07g044740.1.1 | Tomato | cytosol | 25.65 | 83.08 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 84.09 | 82.9 |
| Solyc07g043690.1.1 | Tomato | cytosol | 35.39 | 77.2 |
| Solyc07g043680.2.1 | Tomato | cytosol | 69.36 | 73.37 |
| Solyc12g011160.1.1 | Tomato | cytosol | 60.09 | 65.89 |
| Solyc06g054520.1.1 | Tomato | cytosol | 63.66 | 65.05 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 57.72 | 62.47 |
| Bra030657.1-P | Field mustard | cytosol | 55.58 | 62.23 |
| CDX86518 | Canola | cytosol | 55.82 | 61.36 |
| KRH46020 | Soybean | vacuole | 57.96 | 61.31 |
| CDY15584 | Canola | cytosol | 54.63 | 60.69 |
| KRG98957 | Soybean | nucleus | 57.72 | 60.6 |
| AT1G06550.1 | Thale cress | cytosol | 55.11 | 59.95 |
| CDY15581 | Canola | cytosol | 37.53 | 57.88 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 52.73 | 57.81 |
| EES03617 | Sorghum | cytosol | 52.49 | 57.7 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 44.18 | 55.86 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 50.12 | 54.81 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 50.12 | 54.81 |
| Bra030656.1-P | Field mustard | cytosol | 46.56 | 54.29 |
| CDY15583 | Canola | cytosol | 47.51 | 54.2 |
| Os01t0752200-01 | Rice | plasma membrane | 49.88 | 53.98 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 49.41 | 53.33 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 28.5 | 53.33 |
| CDX86519 | Canola | extracellular | 24.23 | 51.52 |
| Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 10.45 | 49.44 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 54.16 | 48.31 |
| Solyc05g032680.2.1 | Tomato | mitochondrion | 12.59 | 46.9 |
| Solyc01g094090.2.1 | Tomato | cytosol | 33.02 | 42.25 |
| Solyc01g108800.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 37.05 | 41.16 |
| Bra030655.1-P | Field mustard | extracellular | 17.34 | 40.78 |
| Solyc01g080930.2.1 | Tomato | cytosol | 36.58 | 40.21 |
| Solyc01g090700.2.1 | Tomato | mitochondrion | 36.82 | 38.37 |
| Solyc10g085630.1.1 | Tomato | mitochondrion | 36.34 | 37.32 |
| Solyc05g018410.1.1 | Tomato | plastid | 21.14 | 29.67 |
| Solyc01g108790.1.1 | Tomato | nucleus | 11.64 | 27.84 |
| Solyc07g022880.2.1 | Tomato | cytosol | 7.36 | 21.53 |
Protein Annotations
| EnsemblPlants:Solyc07g044720.1.1 | EnsemblPlantsGene:Solyc07g044720.1 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 |
| SEG:seg | SUPFAM:SSF52096 | UniParc:UPI000276C5E9 | UniProt:K4CEN0 | MapMan:50.3.1 | : |
Description
No Description!
Coordinates
chr7:+:57750324..57753324
Molecular Weight (calculated)
47929.7 Da
IEP (calculated)
8.115
GRAVY (calculated)
-0.389
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVISIPSST TMFPMPQQVL RQNKEVVMAE EMGCARMLTL NRPDNLNYIS AKVALALGQN FEKYENDDNA DFVIIKGAGR TFSGGGDLHM FYDGRNTRDS
101: CIEGTYRMYW LCYHIHTYKK PHIALVHGMS VGGGASLMTP MKFSVVTEKA FSSTPEINIG FHPDCGFSYM LPRLPGRLGE YLGLTGEKLR GKEVVAAGLA
201: THYVPSQKLF QLEKRLVSLK NGDEDTIRSV INKFSSNIQI DERSILNKLS IINECFSKDS VEEIIESFEA EASKKGNDWI MPVLKRLKKA SPTSLKITLR
301: SIREGRTQTI SECLRREFRI SMNIQRTIIS GDFYEGIRAQ VIDKDKSPKW NPSTLDKVLD DQLDLIFKPF EDHDLELQIP VDEEELYRWR GKYEKFQLFS
401: SQPSERQKAL RSVSSRESVF V
101: CIEGTYRMYW LCYHIHTYKK PHIALVHGMS VGGGASLMTP MKFSVVTEKA FSSTPEINIG FHPDCGFSYM LPRLPGRLGE YLGLTGEKLR GKEVVAAGLA
201: THYVPSQKLF QLEKRLVSLK NGDEDTIRSV INKFSSNIQI DERSILNKLS IINECFSKDS VEEIIESFEA EASKKGNDWI MPVLKRLKKA SPTSLKITLR
301: SIREGRTQTI SECLRREFRI SMNIQRTIIS GDFYEGIRAQ VIDKDKSPKW NPSTLDKVLD DQLDLIFKPF EDHDLELQIP VDEEELYRWR GKYEKFQLFS
401: SQPSERQKAL RSVSSRESVF V
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.