Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400079108 | Potato | cytosol | 72.09 | 86.34 |
| Solyc12g011160.1.1 | Tomato | cytosol | 65.78 | 70.57 |
| Solyc07g043690.1.1 | Tomato | cytosol | 31.8 | 67.88 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 64.08 | 67.87 |
| Bra030657.1-P | Field mustard | cytosol | 60.44 | 66.22 |
| Solyc07g044710.1.1 | Tomato | plastid | 62.86 | 65.74 |
| CDX86518 | Canola | cytosol | 60.19 | 64.75 |
| CDY15584 | Canola | cytosol | 59.47 | 64.64 |
| AT1G06550.1 | Thale cress | cytosol | 60.68 | 64.6 |
| Solyc07g044720.1.1 | Tomato | plastid | 65.05 | 63.66 |
| Solyc07g043680.2.1 | Tomato | cytosol | 60.68 | 62.81 |
| KRH46020 | Soybean | vacuole | 60.44 | 62.56 |
| KRG98957 | Soybean | nucleus | 59.95 | 61.6 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 63.35 | 61.12 |
| EES03617 | Sorghum | cytosol | 56.55 | 60.84 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 56.07 | 60.16 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 48.3 | 59.76 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 55.83 | 59.74 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 32.52 | 59.56 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 55.34 | 59.22 |
| Os01t0752200-01 | Rice | plasma membrane | 55.58 | 58.87 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 55.34 | 58.46 |
| Bra030656.1-P | Field mustard | cytosol | 50.49 | 57.62 |
| CDY15583 | Canola | cytosol | 51.21 | 57.18 |
| Solyc07g044740.1.1 | Tomato | cytosol | 17.48 | 55.38 |
| CDY15581 | Canola | cytosol | 36.65 | 55.31 |
| Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 11.16 | 51.69 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 55.83 | 48.73 |
| CDX86519 | Canola | extracellular | 22.57 | 46.97 |
| Solyc05g032680.2.1 | Tomato | mitochondrion | 12.38 | 45.13 |
| Solyc01g094090.2.1 | Tomato | cytosol | 35.19 | 44.07 |
| Solyc01g108800.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 38.35 | 41.69 |
| Solyc01g080930.2.1 | Tomato | cytosol | 38.59 | 41.51 |
| Bra030655.1-P | Field mustard | extracellular | 17.72 | 40.78 |
| Solyc01g090700.2.1 | Tomato | mitochondrion | 37.38 | 38.12 |
| Solyc10g085630.1.1 | Tomato | mitochondrion | 35.19 | 35.37 |
| Solyc07g022880.2.1 | Tomato | cytosol | 9.22 | 26.39 |
| Solyc05g018410.1.1 | Tomato | plastid | 19.17 | 26.33 |
| Solyc01g108790.1.1 | Tomato | nucleus | 10.92 | 25.57 |
Protein Annotations
| EnsemblPlants:Solyc06g054520.1.1 | EnsemblPlantsGene:Solyc06g054520.1 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 |
| SEG:seg | SUPFAM:SSF52096 | UniParc:UPI0002765B81 | UniProt:K4C6D8 | MapMan:50.3.1 | : |
Description
No Description!
Coordinates
chr6:+:37272183..37277139
Molecular Weight (calculated)
46486.8 Da
IEP (calculated)
8.923
GRAVY (calculated)
-0.238
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQEIVKLDR EDVVIAEEIG GVGVITINRP KQLNVLSNKV ILLLGEKLEK LEKDDSTKLV IIKGAGKAFS AGGDLKMFYY GQKTRDSCLE ATYRMYWLCY
101: HIHTYKKPLV ALVHGMSMGG GASLMTPMKF SVVTEKTVFS TPETLIGFHP DCGFSYMLSR LSGRLGEYLG LTGARLKGKE VVAAGLATHI VPSQKLVELE
201: KCLLSLNSGD ENAIESVIKE FSTDFEIHEN SILQLNRMSI INECFSKDTV EEILMSFEAE AHKLGNDWIQ PVLKHLKRLS PTGLKITLRS IREGRKQTLS
301: ECLKKEFRIS NNILRKTISN DFYEGISAIV INKKKSPKWC PTTLEEVKDE QVNLIFKNFE QHLELQIPEK NEQRWKGKYD NSPHYYRINQ AMKIQKVLPS
401: TTPGIGLIQS AL
101: HIHTYKKPLV ALVHGMSMGG GASLMTPMKF SVVTEKTVFS TPETLIGFHP DCGFSYMLSR LSGRLGEYLG LTGARLKGKE VVAAGLATHI VPSQKLVELE
201: KCLLSLNSGD ENAIESVIKE FSTDFEIHEN SILQLNRMSI INECFSKDTV EEILMSFEAE AHKLGNDWIQ PVLKHLKRLS PTGLKITLRS IREGRKQTLS
301: ECLKKEFRIS NNILRKTISN DFYEGISAIV INKKKSPKWC PTTLEEVKDE QVNLIFKNFE QHLELQIPEK NEQRWKGKYD NSPHYYRINQ AMKIQKVLPS
401: TTPGIGLIQS AL
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.