Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400020300 | Potato | cytosol | 96.09 | 96.09 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 74.48 | 73.52 |
| Bra030657.1-P | Field mustard | cytosol | 71.35 | 72.87 |
| CDX86518 | Canola | cytosol | 72.14 | 72.32 |
| CDY15584 | Canola | cytosol | 70.05 | 70.98 |
| AT1G06550.1 | Thale cress | cytosol | 70.05 | 69.51 |
| EES03617 | Sorghum | cytosol | 68.75 | 68.93 |
| Solyc07g043690.1.1 | Tomato | cytosol | 34.64 | 68.91 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 67.97 | 67.97 |
| KRG98957 | Soybean | nucleus | 70.83 | 67.83 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 67.97 | 67.79 |
| KRH46020 | Soybean | vacuole | 69.79 | 67.34 |
| Os01t0752200-01 | Rice | plasma membrane | 67.97 | 67.1 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 58.07 | 66.97 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 66.93 | 66.75 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 38.8 | 66.22 |
| Solyc06g054520.1.1 | Tomato | cytosol | 70.57 | 65.78 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 66.67 | 65.64 |
| Solyc07g044710.1.1 | Tomato | plastid | 65.1 | 63.45 |
| CDY15581 | Canola | cytosol | 44.27 | 62.27 |
| Solyc07g043680.2.1 | Tomato | cytosol | 64.06 | 61.81 |
| Bra030656.1-P | Field mustard | cytosol | 57.29 | 60.94 |
| CDY15583 | Canola | cytosol | 58.33 | 60.7 |
| Solyc07g044720.1.1 | Tomato | plastid | 65.89 | 60.09 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 65.36 | 58.78 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 66.93 | 54.45 |
| Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 12.5 | 53.93 |
| Solyc07g044740.1.1 | Tomato | cytosol | 18.23 | 53.85 |
| CDX86519 | Canola | extracellular | 27.6 | 53.54 |
| Solyc01g094090.2.1 | Tomato | cytosol | 36.98 | 43.16 |
| Bra030655.1-P | Field mustard | extracellular | 19.53 | 41.9 |
| Solyc01g108800.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 41.15 | 41.69 |
| Solyc01g080930.2.1 | Tomato | cytosol | 41.15 | 41.25 |
| Solyc05g032680.2.1 | Tomato | mitochondrion | 11.98 | 40.71 |
| Solyc01g090700.2.1 | Tomato | mitochondrion | 40.89 | 38.86 |
| Solyc10g085630.1.1 | Tomato | mitochondrion | 39.06 | 36.59 |
| Solyc07g022880.2.1 | Tomato | cytosol | 10.42 | 27.78 |
| Solyc05g018410.1.1 | Tomato | plastid | 21.35 | 27.33 |
| Solyc01g108790.1.1 | Tomato | nucleus | 10.94 | 23.86 |
Protein Annotations
| EnsemblPlants:Solyc12g011160.1.1 | EnsemblPlantsGene:Solyc12g011160.1 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 |
| SEG:seg | SUPFAM:SSF52096 | UniParc:UPI000276A18D | UniProt:K4DCK2 | MapMan:50.3.1 | : |
Description
No Description!
Coordinates
chr12:+:4008070..4012664
Molecular Weight (calculated)
42755.2 Da
IEP (calculated)
5.137
GRAVY (calculated)
-0.262
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQETLNLEQ EVVLVEELGN ARVVTLNNPK QLNVISPKVV VLLAANLEKW EKDENAKLVI IKGAGRAFSA GGDLKMFYNG RNSKDSCLEV VYRMYWLCNH
101: IHTYKKTTVA LVHGISMGGG ASLMAPMKFS VVTEKTVFST PEASIGFHTD CGFSYMLSRL PGRLGEYLGL TGARLNGKEL VAVGLATHFV PLEKLPELEK
201: HLLSLNTGDE AAVGSAIKEF STDVQIDEES ILKKQSIIDE CFSKDSVAEI ISSFETEAGK EGNGWIVPVL KGLKRSSPTG LKITLRSIRE GRKQTLSECL
301: KKEFRITINT LRARISGDVY EGIRALTIDK DNSPKWDPLT LENVEDEQVN LVFEPFEEDF ELKVSENEQD RWDGKYEDSA YCHQ
101: IHTYKKTTVA LVHGISMGGG ASLMAPMKFS VVTEKTVFST PEASIGFHTD CGFSYMLSRL PGRLGEYLGL TGARLNGKEL VAVGLATHFV PLEKLPELEK
201: HLLSLNTGDE AAVGSAIKEF STDVQIDEES ILKKQSIIDE CFSKDSVAEI ISSFETEAGK EGNGWIVPVL KGLKRSSPTG LKITLRSIRE GRKQTLSECL
301: KKEFRITINT LRARISGDVY EGIRALTIDK DNSPKWDPLT LENVEDEQVN LVFEPFEEDF ELKVSENEQD RWDGKYEDSA YCHQ
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.