Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054311 | Potato | cytosol | 43.52 | 52.83 |
| Solyc07g043680.2.1 | Tomato | cytosol | 90.67 | 43.97 |
| Solyc05g032680.2.1 | Tomato | mitochondrion | 24.35 | 41.59 |
| Solyc07g044740.1.1 | Tomato | cytosol | 27.98 | 41.54 |
| CDY15581 | Canola | cytosol | 56.99 | 40.29 |
| Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 18.13 | 39.33 |
| Solyc07g044710.1.1 | Tomato | plastid | 76.17 | 37.31 |
| Solyc07g044720.1.1 | Tomato | plastid | 77.2 | 35.39 |
| Solyc12g011160.1.1 | Tomato | cytosol | 68.91 | 34.64 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 75.65 | 34.19 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 57.51 | 33.33 |
| Bra030657.1-P | Field mustard | cytosol | 63.21 | 32.45 |
| CDX86519 | Canola | extracellular | 33.16 | 32.32 |
| Solyc06g054520.1.1 | Tomato | cytosol | 67.88 | 31.8 |
| CDX86518 | Canola | cytosol | 62.69 | 31.59 |
| CDY15584 | Canola | cytosol | 61.14 | 31.13 |
| AT1G06550.1 | Thale cress | cytosol | 62.18 | 31.01 |
| CDY15583 | Canola | cytosol | 59.07 | 30.89 |
| Bra030656.1-P | Field mustard | cytosol | 57.51 | 30.75 |
| Bra030655.1-P | Field mustard | extracellular | 28.5 | 30.73 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 61.14 | 30.33 |
| KRH46020 | Soybean | vacuole | 62.18 | 30.15 |
| EES03617 | Sorghum | cytosol | 58.03 | 29.24 |
| KRG98957 | Soybean | nucleus | 60.62 | 29.18 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 58.03 | 29.17 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 58.03 | 29.09 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 56.99 | 28.57 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 56.48 | 27.95 |
| Os01t0752200-01 | Rice | plasma membrane | 55.96 | 27.76 |
| Solyc01g080930.2.1 | Tomato | cytosol | 51.3 | 25.85 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 60.1 | 24.58 |
| Solyc01g108800.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 48.19 | 24.54 |
| Solyc01g094090.2.1 | Tomato | cytosol | 39.38 | 23.1 |
| Solyc10g085630.1.1 | Tomato | mitochondrion | 48.19 | 22.68 |
| Solyc01g090700.2.1 | Tomato | mitochondrion | 47.15 | 22.52 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 25.39 | 21.78 |
| Solyc01g108790.1.1 | Tomato | nucleus | 19.17 | 21.02 |
| Solyc05g018410.1.1 | Tomato | plastid | 27.98 | 18.0 |
| Solyc07g022880.2.1 | Tomato | cytosol | 1.04 | 1.39 |
Protein Annotations
| EnsemblPlants:Solyc07g043690.1.1 | EnsemblPlantsGene:Solyc07g043690.1 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 |
| SUPFAM:SSF52096 | UniParc:UPI000276C5E5 | UniProt:K4CEM6 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7:+:57665198..57666898
Molecular Weight (calculated)
21652.3 Da
IEP (calculated)
5.344
GRAVY (calculated)
-0.082
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSCFCSTPE ANLGCHSDCG LSYILSRLPG RLGEYLGLIG AKLNGKEVVA PGLATHFVPS HKLFLLSIID DCFSRETVEE ILDSFEAEAG KKGNDWIMPV
101: LKSIKKASPI GLKITLISIR EGRIQTLSEC LRREFRIMIN TLTIISQDFY EGIRAAIIDK DESPKWNPST LDKVHDEQLD LIFKPFDEHD LEL
101: LKSIKKASPI GLKITLISIR EGRIQTLSEC LRREFRIMIN TLTIISQDFY EGIRAAIIDK DESPKWNPST LDKVHDEQLD LIFKPFDEHD LEL
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.