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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_04s0008g06610.t01 Wine grape mitochondrion 73.9 74.45
KRH05370 Soybean mitochondrion 68.54 69.04
AT4G31810.1 Thale cress mitochondrion 67.56 67.73
KRH15650 Soybean mitochondrion 67.07 67.57
Bra010219.1-P Field mustard mitochondrion 65.61 65.61
CDY23311 Canola mitochondrion 65.37 65.37
CDY39880 Canola mitochondrion 65.12 65.12
GSMUA_Achr4P27030_001 Banana mitochondrion 62.2 62.96
EER91964 Sorghum mitochondrion 62.2 62.81
Zm00001d029860_P001 Maize plasma membrane 61.22 61.82
TraesCS1D01G213600.1 Wheat mitochondrion 60.73 61.03
TraesCS1B01G224200.1 Wheat mitochondrion 60.73 61.03
TraesCS1A01G210300.2 Wheat mitochondrion 60.73 61.03
Os10t0552900-01 Rice mitochondrion 59.76 59.61
GSMUA_Achr4P30390_001 Banana mitochondrion 62.2 58.09
Solyc01g090700.2.1 Tomato mitochondrion 56.83 57.67
Solyc05g032690.2.1 Tomato cytosol, mitochondrion, nucleus 11.95 55.06
Solyc07g043690.1.1 Tomato cytosol 22.68 48.19
Solyc01g080930.2.1 Tomato cytosol 41.71 44.65
Solyc01g094090.2.1 Tomato cytosol 34.39 42.86
Solyc01g108800.2.1 Tomato cytoskeleton, cytosol, peroxisome 38.05 41.16
Solyc12g011160.1.1 Tomato cytosol 36.59 39.06
Solyc05g032680.2.1 Tomato mitochondrion 10.49 38.05
Solyc07g044710.1.1 Tomato plastid 36.1 37.56
Solyc07g043680.2.1 Tomato cytosol 35.61 36.68
Solyc07g044720.1.1 Tomato plastid 37.32 36.34
Solyc07g044730.2.1 Tomato endoplasmic reticulum, vacuole 36.83 35.36
Solyc06g054520.1.1 Tomato cytosol 35.37 35.19
Solyc07g044740.1.1 Tomato cytosol 9.76 30.77
Solyc05g018410.1.1 Tomato plastid 22.2 30.33
Solyc07g022880.2.1 Tomato cytosol 9.76 27.78
Solyc01g108790.1.1 Tomato nucleus 11.46 26.7
Protein Annotations
Gene3D:3.90.226.40MapMan:50.3.1InterPro:ClpP/crotonase-like_dom_sfGO:GO:0003674GO:GO:0003824GO:GO:0003860
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0016787
InterPro:HIBYL-CoA-HUniProt:K4D3Z7PFAM:PF16113PANTHER:PTHR43176PANTHER:PTHR43176:SF8SUPFAM:SSF52096
EnsemblPlantsGene:Solyc10g085630.1EnsemblPlants:Solyc10g085630.1.1UniParc:UPI000276AA2E:::
Description
No Description!
Coordinates
chr10:+:64748141..64757276
Molecular Weight (calculated)
46567.7 Da
IEP (calculated)
5.750
GRAVY (calculated)
-0.296
Length
410 amino acids
Sequence
(BLAST)
001: MKMHKLKALL SLSKPFRRND SSFILSNHYC RQFSAQPSYA DYLQEQVLVE GRAKSRAAIL NRPSALNALT PSMAGRLSRL YESWEENSDI GFVMMKSNGR
101: AFCSGADVVT LYELINEGKV EECKKFFQTL YKFVYLLGTY LKPNVAILDG VTMGSGAGIS LPGMFRVVTN RTVYSNPEAQ IGFHPDAGAS YYLSRLPGYL
201: GEYLALTGEK LNGVEMIACG LATHYSHNER LPWIEERLGK LITDDRLVIE NSIAQYGDIV YPDTRSVLHK FEKIDKCFSQ DTVEEIIEAL ERDAAESHDE
301: WCNTALNKIK EASPLSLKVA LKSIREGRFQ PLDQCLVREY RISVNWVSKR MSDDFCEGVR ARLVDKDFAP KWDPTRLEEV TNDMVDRFFI QLDELEPELN
401: LATAIREPSM
Best Arabidopsis Sequence Match ( AT4G31810.1 )
(BLAST)
001: MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS
101: GADVLSLYHS INEGNTEESK LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH PDAGASYYLS RLPGYLGEYL
201: ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301: TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL
401: PTAQREPYF
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.