CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05370	Soybean	mitochondrion	94.84	94.84
VIT_04s0008g06610.t01	Wine grape	mitochondrion	71.5	71.5
AT4G31810.1	Thale cress	mitochondrion	69.53	69.19
Bra010219.1-P	Field mustard	mitochondrion	67.57	67.07
Solyc10g085630.1.1	Tomato	mitochondrion	67.57	67.07
CDY23311	Canola	mitochondrion	67.32	66.83
CDY39880	Canola	mitochondrion	67.08	66.59
GSMUA_Achr4P27030_001	Banana	mitochondrion	60.69	60.99
TraesCS1D01G213600.1	Wheat	mitochondrion	58.72	58.58
TraesCS1B01G224200.1	Wheat	mitochondrion	58.72	58.58
TraesCS1A01G210300.2	Wheat	mitochondrion	58.72	58.58
Zm00001d029860_P001	Maize	plasma membrane	57.74	57.88
Os10t0552900-01	Rice	mitochondrion	58.23	57.66
EER91964	Sorghum	mitochondrion	57.49	57.64
GSMUA_Achr4P30390_001	Banana	mitochondrion	61.92	57.4
KRH66607	Soybean	mitochondrion	57.74	54.02
PGSC0003DMT400043000	Potato	cytosol	24.82	51.79
KRH07311	Soybean	nucleus	40.54	42.64
KRH46020	Soybean	vacuole	35.63	36.43
KRH09309	Soybean	mitochondrion	34.89	35.68
KRG98957	Soybean	nucleus	34.89	35.41
KRH41609	Soybean	nucleus	29.98	29.9
KRH60315	Soybean	nucleus	29.48	29.41

Protein Annotations

EMBL:ACUP02008623	EnsemblPlants:KRH15650	EnsemblPlantsGene:GLYMA_14G102600	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF8
PFAM:PF16113	ProteinID:KRH15649.1	ProteinID:KRH15650	ProteinID:KRH15650.1	SEG:seg	SUPFAM:SSF52096
UniParc:UPI000233BB28	UniProt:I1M992	MapMan:50.3.1	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:10180714..10191178

Molecular Weight (calculated)

45967.8 Da

IEP (calculated)

5.516

GRAVY (calculated)

-0.279

Length

407 amino acids

Sequence
(BLAST)

001: MQRFKALLPQ QTRSSLRTFC SHRRAFSAQP NYSEHHDDDS QEQILVEGRA KSRAAILNRP SSLNSLNASM VARLKRLYDS WEENSDIGFV LMKGSGRAFC
101: SGADVVRLYQ SLNEGNTDEA EQFFKTLYSF VYLQGTYLKP HVAILDGITM GCGSGISLPG MFRVVTDKTI FSHPETQIGF HPDAGASYIL SRLPGYLGEY
201: LALTGDKLNG VEMIACRLAT HYSLNARLAL LEERLGKLIT DEPSVVEASL AQYGDLVYPD RSSVLHRIDT IDRCFSQETV EEIIEALGKE ATESCDEWCL
301: NTLRRIREAS PLSLKVTLQS IREGRFETLD KCLIREYRMS LRGISKLVSS DFFEGVRARM VDKDFAPKWD PPSLKDISED MIEYYFSPLS EVQSELVLPT
401: ALREPYM

Best Arabidopsis Sequence Match ( AT3G60510.3 )
(BLAST)

001: MHNAKGLLGR IVRDKLWRFG YRRSLCSLKL TSEDLDYQVL VEGSGCSRTA ILNRPPALNA LTTHMGYRLQ KLYKNWEEDP NIGFVMMKGS GRAFCAGGDI
101: VSLYHLRTRG SPDAIREFFS SLYSFIYLLG TYLKPHVAIL NGVTMGGGTG VSIPGTFRVA TDRTIFATPE TIIGFHPDAG ASFNLSHLPG RLGEYLGLTG
201: LKLSGAEMLA CGLATHYIRS EEVPVMEEQL KKLLTDDPSV VESCLEKCAE VAHPEKTGVI RRIDLLEKCF SHDTVEEIID SLVSFFTNDS ASMTISVTRS
301: NSVLGHQEIE ASRRKDTWCI TTLRRLKESS PLSLKVALRS IREGRLQTLD QCLIREYRMS LQGLIGPMSG NFCEGVRARL IDKDEAPKWD PPSLEKVSED
401: MVDDYFCALT PTEPDLDLPV KLRESI

Arabidopsis Description

ATP-dependent caseinolytic (Clp) protease/crotonase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.