Factsheet for GSMUA_Achr4P30390_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P27030_001	Banana	mitochondrion	76.77	83.21
TraesCS1B01G224200.1	Wheat	mitochondrion	69.93	75.25
TraesCS1D01G213600.1	Wheat	mitochondrion	69.7	75.0
TraesCS1A01G210300.2	Wheat	mitochondrion	69.48	74.75
EER91964	Sorghum	mitochondrion	67.88	73.4
Zm00001d029860_P001	Maize	plasma membrane	67.43	72.91
Os10t0552900-01	Rice	mitochondrion	67.43	72.02
VIT_04s0008g06610.t01	Wine grape	mitochondrion	60.82	65.6
Solyc10g085630.1.1	Tomato	mitochondrion	58.09	62.2
KRH05370	Soybean	mitochondrion	57.63	62.16
KRH15650	Soybean	mitochondrion	57.4	61.92
Bra010219.1-P	Field mustard	mitochondrion	56.72	60.73
CDY23311	Canola	mitochondrion	56.72	60.73
AT4G31810.1	Thale cress	mitochondrion	56.49	60.64
CDY39880	Canola	mitochondrion	56.26	60.24
PGSC0003DMT400043000	Potato	cytosol	25.06	56.41
GSMUA_Achr5P13870_001	Banana	cytosol	40.32	44.81
GSMUA_Achr5P13900_001	Banana	cytosol	31.21	43.91
GSMUA_Achr8P14800_001	Banana	cytosol	39.41	43.58
GSMUA_Achr4P17090_001	Banana	cytosol, nucleus, peroxisome	18.45	40.1
GSMUA_Achr5P13890_001	Banana	nucleus	12.76	35.0
GSMUA_Achr4P17080_001	Banana	mitochondrion	12.98	32.95
GSMUA_Achr7P08560_001	Banana	cytosol	28.02	32.45
GSMUA_Achr7P13260_001	Banana	cytosol	27.56	32.35
GSMUA_Achr9P06670_001	Banana	plastid	33.71	31.36
GSMUA_Achr6P00740_001	Banana	cytosol	26.88	31.3

Protein Annotations

EnsemblPlants:GSMUA_Achr4P30390_001	EnsemblPlants:GSMUA_Achr4T30390_001	EnsemblPlantsGene:GSMUA_Achr4G30390_001	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	ncoils:Coil	PANTHER:PTHR43176
PANTHER:PTHR43176:SF8	PFAM:PF16113	SUPFAM:SSF52096	UniParc:UPI000294B181	UniProt:M0STF1	MapMan:50.3.1

Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr4G30390_001]

Coordinates

chr4:-:28015304..28021959

Molecular Weight (calculated)

49230.1 Da

IEP (calculated)

6.901

GRAVY (calculated)

-0.248

Length

439 amino acids

Sequence
(BLAST)

001: MIDYNGFGVF RYIRRNLSFI TSRRLRKPYS TDGRRPAEMQ RFRALASARR SIPSLRRALS TTRPSSAHDH ELQDEVLVEG KAAARTAILN RPSALNALTT
101: SMGIRLKKLY ESWEDNPDIG FVLMKGSGKA FCAGGDVVTL YRLLNEGKVE NCKDFFRNLY MFIYVVGTYL KPHVAILDGI TMGGGAGVSI PGTFRIATDK
201: TIFATPEVHI GFHPDAGASF YLSNLNGHLG EYLALTGEKL NGVDMLAVGL ATNYSMSDRL DWVDERLAKL MTDDPSEIDS TLAQYGDIVY PDKNSIVHRL
301: EAIDKCFGHE TVEEILDALE TEAARSKQDW CISALKKLKE ASPLSLKVSL RSIREGRCQT FDECLVREYR MSLHGISKLV SNDFCEGVRA RLVDKDLAPK
401: WDPPVLEKVS EDMVDHYFSP LGEFEPDLKL PTHLREAFI

Best Arabidopsis Sequence Match ( AT4G31810.1 )
(BLAST)

001: MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS
101: GADVLSLYHS INEGNTEESK LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH PDAGASYYLS RLPGYLGEYL
201: ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301: TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL
401: PTAQREPYF

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.