Factsheet for GSMUA_Achr9P06670_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043490_P001	Maize	cytosol, extracellular	58.26	71.61
EES03617	Sorghum	cytosol	58.05	71.54
Os01t0752200-01	Rice	plasma membrane	58.26	70.69
TraesCS3B01G325800.1	Wheat	cytosol	57.63	70.65
TraesCS3A01G291100.1	Wheat	cytosol	57.2	70.13
TraesCS3D01G290900.1	Wheat	cytosol	49.15	69.67
HORVU3Hr1G072100.2	Barley	cytosol	56.99	68.97
Bra030657.1-P	Field mustard	cytosol	54.66	68.62
CDY15584	Canola	cytosol	53.81	67.02
Solyc12g011160.1.1	Tomato	cytosol	54.45	66.93
VIT_12s0028g00590.t01	Wine grape	cytosol	55.08	66.84
PGSC0003DMT400020300	Potato	cytosol	54.24	66.67
CDX86518	Canola	cytosol	54.03	66.58
AT1G06550.1	Thale cress	cytosol	53.18	64.86
KRH46020	Soybean	vacuole	52.97	62.81
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	29.87	62.67
KRG98957	Soybean	nucleus	51.91	61.1
Solyc07g043690.1.1	Tomato	cytosol	24.58	60.1
PGSC0003DMT400069137	Potato	cytosol, mitochondrion	36.02	60.07
Solyc07g044710.1.1	Tomato	plastid	48.09	57.61
CDY15581	Canola	cytosol	33.26	57.51
Bra030656.1-P	Field mustard	cytosol	43.86	57.34
CDY15583	Canola	cytosol	44.7	57.18
PGSC0003DMT400041136	Potato	cytosol	41.74	56.77
PGSC0003DMT400079108	Potato	cytosol	41.31	56.69
Solyc07g043680.2.1	Tomato	cytosol	47.46	56.28
Solyc06g054520.1.1	Tomato	cytosol	48.73	55.83
PGSC0003DMT400057075	Potato	cytosol, plastid	47.25	55.75
Solyc07g044720.1.1	Tomato	plastid	48.31	54.16
Solyc07g044730.2.1	Tomato	endoplasmic reticulum, vacuole	48.73	53.86
PGSC0003DMT400054311	Potato	cytosol	18.01	53.46
Solyc07g044740.1.1	Tomato	cytosol	14.41	52.31
CDX86519	Canola	extracellular	21.4	51.01
PGSC0003DMT400065713	Potato	cytosol, mitochondrion	25.21	49.58
GSMUA_Achr8P14800_001	Banana	cytosol	35.38	42.07
GSMUA_Achr5P13900_001	Banana	cytosol	27.12	41.03
GSMUA_Achr5P13870_001	Banana	cytosol	33.69	40.25
Bra030655.1-P	Field mustard	extracellular	15.25	40.22
GSMUA_Achr4P27030_001	Banana	mitochondrion	31.99	37.28
GSMUA_Achr4P17090_001	Banana	cytosol, nucleus, peroxisome	15.68	36.63
GSMUA_Achr4P30390_001	Banana	mitochondrion	31.36	33.71
GSMUA_Achr4P17080_001	Banana	mitochondrion	12.29	33.53
GSMUA_Achr6P00740_001	Banana	cytosol	25.64	32.1
GSMUA_Achr7P13260_001	Banana	cytosol	23.94	30.21
GSMUA_Achr7P08560_001	Banana	cytosol	23.94	29.82
GSMUA_Achr5P13890_001	Banana	nucleus	9.75	28.75

Protein Annotations

EnsemblPlants:GSMUA_Achr9P06670_001	EnsemblPlants:GSMUA_Achr9T06670_001	EnsemblPlantsGene:GSMUA_Achr9G06670_001	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0008150	GO:GO:0009628	GO:GO:0016787	GO:GO:0080167	InterPro:ClpP/crotonase-like_dom_sf
InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF2	PFAM:PF16113	SUPFAM:SSF52096	UniParc:UPI00029515A7
UniProt:M0TY26	MapMan:50.3.1	:	:	:	:

Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr9G06670_001]

Coordinates

chr9:+:4269496..4273818

Molecular Weight (calculated)

52828.3 Da

IEP (calculated)

6.359

GRAVY (calculated)

-0.251

Length

472 amino acids

Sequence
(BLAST)

001: MKCQLDNWGA FAPVRSSFSS RSALVVTEPP RDEPSRFVDG LVLSPSDDTP TNNHRLLSYK RHFCELCVHC SNRKNPPSPT TAVTPCNLGM AREHSNSEEV
101: VLAAEVGHAR LITLNRPRQL NVISSRVVFL LAQFLEKWEK DDDSQLVIFK GAGRAFCAGG DLKMFYEGRK DDSCLEVVYR MYWLCYHIHT YKKPMVALAN
201: GIVMGGGASM VVPTKISVVT EKTVFSVPEA SIGLHTDCSF SYILPRLPGY LGEFLALTSA RLNGKEMIAA GLATHFVPSE KLHELENCLV NLSSTDEDSI
301: RAIVEEFSLN VQPDEESILN KLSTIDKCFC EGSVEEIIKS FEAESKMDGN EWISPILKGL KRSSPTGLKI TLKSIRQGRK RTLAECLKNE FRLTMNLLRS
401: VISSDVYEGI RALSIDKDNA PKWNPSSLQE VSREKVDLVF EPFADELELQ IPTDEKSRWS GKYEDTVYPS LK

Best Arabidopsis Sequence Match ( AT1G06550.1 )
(BLAST)

001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.