Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P13890_001 | Banana | nucleus | 21.78 | 27.5 |
| GSMUA_Achr8P14800_001 | Banana | cytosol | 49.01 | 24.94 |
| GSMUA_Achr5P13870_001 | Banana | cytosol | 47.52 | 24.3 |
| GSMUA_Achr4P27030_001 | Banana | mitochondrion | 41.58 | 20.74 |
| GSMUA_Achr5P13900_001 | Banana | cytosol | 28.71 | 18.59 |
| GSMUA_Achr4P30390_001 | Banana | mitochondrion | 40.1 | 18.45 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 36.63 | 15.68 |
| GSMUA_Achr7P08560_001 | Banana | cytosol | 27.72 | 14.78 |
| GSMUA_Achr7P13260_001 | Banana | cytosol | 27.23 | 14.71 |
| GSMUA_Achr6P00740_001 | Banana | cytosol | 26.24 | 14.06 |
| GSMUA_Achr4P17080_001 | Banana | mitochondrion | 2.48 | 2.89 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P17090_001 | EnsemblPlants:GSMUA_Achr4T17090_001 | EnsemblPlantsGene:GSMUA_Achr4G17090_001 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003860 | GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF6 |
| PFAM:PF16113 | SUPFAM:SSF52096 | UniParc:UPI0002948A63 | UniProt:M0SPM2 | MapMan:50.3.1 | : |
Description
Putative Probable 3-hydroxyisobutyryl-CoA hydrolase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G17090_001]
Coordinates
chr4:+:16068493..16071191
Molecular Weight (calculated)
23425.3 Da
IEP (calculated)
7.453
GRAVY (calculated)
-0.379
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MLACGLATHF VLSKDLPSLE KSLYEVDTAD PIIIQGIIAK YVQQTPLKEE SAFRRLDVIN KCFSKQSVEE ILSCLEQQVI SRNEKWITTA IKSINTASPI
101: SLKLFLLSIR KGRSEDLEQC LIREYRMLSH VFRRTVSNDY FEGVRAKFLD KDNNPKWEPS KLELVSNEML KKFLTKLDED EAWEDLQLPS EHRHTNPRIA
201: KL
101: SLKLFLLSIR KGRSEDLEQC LIREYRMLSH VFRRTVSNDY FEGVRAKFLD KDNNPKWEPS KLELVSNEML KKFLTKLDED EAWEDLQLPS EHRHTNPRIA
201: KL
001: MASHSQVLVE EKSSVRILTF NRPKQLNALS FHMVSRLLQL FLAYEEDPSV KLVVLKGQGR AFSAGGDIPP IVRDILQGKL IRGAHYFKVG YTLNYVLSTY
101: RKPQVSILNG IVMGGGAGLS TNGRFRIATE NTVFAMPETA LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSIS LTALEAELYK
201: VGSSNQTFIS TILDAYAEYP HLNQHSSYHR LDVIDRCFSK RTVEEIFSAL EREVTQKPND WLLATIQALE KASPSCLKIS LRSIREGRLQ GVGQCLIREY
301: RMVCHVMKGD ISKDFVEGCR AVLIDKDRNP KWQPRRLEDV TDSMVDQYFE RVEDEEGWED LKFPPRNNLP ALAIAAKL
101: RKPQVSILNG IVMGGGAGLS TNGRFRIATE NTVFAMPETA LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSIS LTALEAELYK
201: VGSSNQTFIS TILDAYAEYP HLNQHSSYHR LDVIDRCFSK RTVEEIFSAL EREVTQKPND WLLATIQALE KASPSCLKIS LRSIREGRLQ GVGQCLIREY
301: RMVCHVMKGD ISKDFVEGCR AVLIDKDRNP KWQPRRLEDV TDSMVDQYFE RVEDEEGWED LKFPPRNNLP ALAIAAKL
Arabidopsis Description
Probable 3-hydroxyisobutyryl-CoA hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEY5]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.