Factsheet for GSMUA_Achr7P13260_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P00740_001	Banana	cytosol	77.01	76.39
GSMUA_Achr7P08560_001	Banana	cytosol	74.87	73.88
CDY64934	Canola	cytosol	64.97	63.78
TraesCS7D01G352500.3	Wheat	mitochondrion	70.32	63.53
Solyc07g022880.2.1	Tomato	cytosol	24.33	63.19
KRH60315	Soybean	nucleus	68.45	62.75
TraesCS7A01G370500.3	Wheat	mitochondrion, plastid	70.32	62.47
TraesCS7B01G257500.1	Wheat	mitochondrion, plastid	70.05	62.38
KRH41609	Soybean	nucleus	67.91	62.25
Solyc05g018410.1.1	Tomato	plastid	49.73	62.0
Bra010664.1-P	Field mustard	cytosol	33.96	61.95
Os06t0594100-01	Rice	mitochondrion	70.05	60.37
KXG20277	Sorghum	plastid	68.72	60.19
CDX94817	Canola	mitochondrion, plastid	66.31	58.63
VIT_11s0016g04290.t01	Wine grape	mitochondrion	70.59	58.54
CDX93011	Canola	plastid	66.04	58.39
AT4G13360.1	Thale cress	mitochondrion	65.24	57.96
Bra001946.1-P	Field mustard	plastid	65.51	57.92
CDY01126	Canola	mitochondrion, plastid	64.71	57.35
AT3G24360.1	Thale cress	plastid	63.9	57.18
Zm00001d046456_P009	Maize	plastid	68.18	57.05
Bra032700.1-P	Field mustard	plastid	64.44	56.97
HORVU7Hr1G085310.1	Barley	peroxisome	65.24	54.34
GSMUA_Achr5P13900_001	Banana	cytosol	26.74	32.05
GSMUA_Achr4P17080_001	Banana	mitochondrion	14.44	31.21
GSMUA_Achr5P13870_001	Banana	cytosol	32.89	31.14
GSMUA_Achr4P27030_001	Banana	mitochondrion	32.09	29.63
GSMUA_Achr8P14800_001	Banana	cytosol	30.75	28.97
GSMUA_Achr4P30390_001	Banana	mitochondrion	32.35	27.56
GSMUA_Achr4P17090_001	Banana	cytosol, nucleus, peroxisome	14.71	27.23
GSMUA_Achr9P06670_001	Banana	plastid	30.21	23.94
GSMUA_Achr5P13890_001	Banana	nucleus	9.36	21.88

Protein Annotations

EnsemblPlants:GSMUA_Achr7P13260_001	EnsemblPlants:GSMUA_Achr7T13260_001	EnsemblPlantsGene:GSMUA_Achr7G13260_001	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF5
PFAM:PF16113	SEG:seg	SUPFAM:SSF52096	UniParc:UPI0002951D0D	UniProt:M0TH63	MapMan:50.3.1

Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr7G13260_001]

Coordinates

chr7:-:10679148..10688311

Molecular Weight (calculated)

40667.8 Da

IEP (calculated)

5.846

GRAVY (calculated)

-0.049

Length

374 amino acids

Sequence
(BLAST)

001: MADSSEDFVK GSVFPNGVAV ITLNRPKALN AMNLEMDFKY HTLLDEWGIN PSIKCVLVES SSPRAFSAGG DVKQITTKYK MSEIIEVFIA EYTLICKISE
101: YRKPYICFMD GVTMGFGIGL SGHGRYRIIT ERTLLAMPEN GIGLFPDVGF AYIAANGPGR GAVGAYLGMT GKRISSPADA LYMGLGTHYV PSGSLAMLKE
201: ALLNVNFSDD PDKDIQALLA GHKKEPESEA QLKMLLPQII SCFANKSISE TIEELKRHQA SSDSVVASWA SDALSGLGTG APFSLCVTQK HFSQVALAHG
301: SVDNHLAKLS GVMKTEFRIA LRSSIRNDFA EGVRAVLVDR DQNPKWRPSN LADVDIAEVE SVFDPLPHEN ELNV

Best Arabidopsis Sequence Match ( AT3G24360.2 )
(BLAST)

001: MIKSLSLASA RIFFSRTSPS FLIPFSKLSV SHRRKFSVMA SGSDEFVKGN VYPNGVALIT LDRPKALNAM NLEMDLKYKS LLDEWEYDPG VKCVVVEGST
101: SRAFCAGGDV KQITSKNQLS DMIEVFTAEY SLICKIAGYR KPYISLMDGI TMGFGLGLSG HGRYRVITER TVLAMPENGI GLFPDVGFSY IAAHSPGEGS
201: VGAYLGMTGR RISTPSDALF VGLGTHYVPS GKLGSLREAI LSADLSKDPQ QHIQATLSNY SSDPETESHL QMLLPQIESA FSVSKSVKET IEELKKFQQS
301: SEASVAEWAN EAVQGIEKGA PFSLYLTHKY FSKVACAKGK TNNAMATLNG VMITEYRIAL RSALRSDFTE GVRAVLTDKD QNPKWKPASL DEVDETEVDA
401: LFMPLSPEFE ELNV

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LK08]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.