Factsheet for Bra001946.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93011	Canola	plastid	99.05	99.05
AT3G24360.1	Thale cress	plastid	82.51	83.49
Bra010664.1-P	Field mustard	cytosol	39.48	81.46
Bra032700.1-P	Field mustard	plastid	76.6	76.6
Solyc07g022880.2.1	Tomato	cytosol	25.3	74.31
KRH60315	Soybean	nucleus	68.32	70.83
KRH41609	Soybean	nucleus	67.38	69.85
GSMUA_Achr6P00740_001	Banana	cytosol	59.81	67.11
GSMUA_Achr7P08560_001	Banana	cytosol	59.1	65.96
GSMUA_Achr7P13260_001	Banana	cytosol	57.92	65.51
VIT_11s0016g04290.t01	Wine grape	mitochondrion	66.9	62.75
TraesCS7D01G352500.3	Wheat	mitochondrion	60.52	61.84
Solyc05g018410.1.1	Tomato	plastid	43.74	61.67
TraesCS7A01G370500.3	Wheat	mitochondrion, plastid	60.99	61.28
KXG20277	Sorghum	plastid	61.7	61.12
TraesCS7B01G257500.1	Wheat	mitochondrion, plastid	60.52	60.95
Os06t0594100-01	Rice	mitochondrion	61.23	59.68
HORVU7Hr1G085310.1	Barley	peroxisome	57.92	54.57
Zm00001d046456_P009	Maize	plastid	57.21	54.14
Bra031802.1-P	Field mustard	cytosol	31.21	35.11
Bra030657.1-P	Field mustard	cytosol	30.5	34.31
Bra018395.1-P	Field mustard	cytosol	30.02	34.05
Bra018392.1-P	Field mustard	cytosol	28.37	32.26
Bra039968.1-P	Field mustard	peroxisome	29.55	31.33
Bra003417.1-P	Field mustard	mitochondrion	29.08	30.75
Bra030656.1-P	Field mustard	cytosol	25.53	29.92
Bra010219.1-P	Field mustard	mitochondrion	28.84	29.76
Bra039975.1-P	Field mustard	peroxisome	26.71	29.35
Bra030655.1-P	Field mustard	extracellular	8.98	21.23

Protein Annotations

EnsemblPlants:Bra001946.1	EnsemblPlants:Bra001946.1-P	EnsemblPlantsGene:Bra001946	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H
PANTHER:PTHR43176	PANTHER:PTHR43176:SF5	PFAM:PF16113	SEG:seg	SUPFAM:SSF52096	UniParc:UPI00025407C3
UniProt:M4CCL6	MapMan:50.3.1	:	:	:	:

Description

AT3G24360 (E=4e-190) | enoyl-CoA hydratase/isomerase family protein

Coordinates

chrA03:-:19512274..19514810

Molecular Weight (calculated)

46077.2 Da

IEP (calculated)

6.071

GRAVY (calculated)

-0.144

Length

423 amino acids

Sequence
(BLAST)

001: MIKTLGVASA RFFFSGHPPT THNICVSSHS VSSRRKFSVM ASGSSGGGEE FVKGNVYPNG VAVITLDRPK ALNAMNLEMD LKYKSLLEEW ESDPKVKCVV
101: VEGSTPRAFC AGMDIKGVVA DIFVDKHTPL VQKVFTAEYT LICKIAGYKK PYISLMDGIT MGFGLGLTGH GRYRVITERT VLAMPENGIG LFPDVGFSYI
201: AAHTPGRGSV GAYLGMTGRR ISTPSDAMFV GLGTHYVPSG KLASLKEAFL SADISKDPHQ DIQATLAEYN SDPDSEAYLK MMLPQIETAF SASKSVKETI
301: EELKKYQQST EASVAEWADE ALQGLGKGAP FSLYLTHKYF SQVACAMGKT DNEMATLNDV MKTEYRIALR AALRGDFTEG VRAVLIDKDQ NPKWKPASLD
401: EVEETEVDAL FKPLSPEVEE LSV

Best Arabidopsis Sequence Match ( AT3G24360.1 )
(BLAST)

001: MIKSLSLASA RIFFSRTSPS FLIPFSKLSV SHRRKFSVMA SGSDEFVKGN VYPNGVALIT LDRPKALNAM NLEMDLKYKS LLDEWEYDPG VKCVVVEGST
101: SRAFCAGMDI KGVVAEILMD KNTSLVQKVF TAEYSLICKI AGYRKPYISL MDGITMGFGL GLSGHGRYRV ITERTVLAMP ENGIGLFPDV GFSYIAAHSP
201: GEGSVGAYLG MTGRRISTPS DALFVGLGTH YVPSGKLGSL REAILSADLS KDPQQHIQAT LSNYSSDPET ESHLQMLLPQ IESAFSVSKS VKETIEELKK
301: FQQSSEASVA EWANEAVQGI EKGAPFSLYL THKYFSKVAC AKGKTNNAMA TLNGVMITEY RIALRSALRS DFTEGVRAVL TDKDQNPKWK PASLDEVDET
401: EVDALFMPLS PEFEELNV

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LK08]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.