Factsheet for Bra039968.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31769	Canola	peroxisome	99.75	99.25
Bra039975.1-P	Field mustard	peroxisome	81.2	84.16
Bra031802.1-P	Field mustard	cytosol	76.94	81.65
AT2G30660.1	Thale cress	peroxisome	75.69	79.89
AT2G30650.1	Thale cress	peroxisome	73.18	77.25
Bra018392.1-P	Field mustard	cytosol	70.68	75.81
Bra018395.1-P	Field mustard	cytosol	70.68	75.6
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	61.65	66.49
PGSC0003DMT400066411	Potato	nucleus	24.06	65.75
Solyc01g080930.2.1	Tomato	cytosol	62.41	65.01
PGSC0003DMT400004567	Potato	extracellular	21.3	64.39
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	60.4	63.59
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	10.53	61.76
KRH07311	Soybean	nucleus	59.9	61.76
PGSC0003DMT400066414	Potato	cytosol	26.07	60.82
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	40.35	60.53
PGSC0003DMT400000054	Potato	cytosol	57.89	60.16
Zm00001d007726_P001	Maize	peroxisome	36.84	60.0
EER91893	Sorghum	cytosol	57.89	59.84
PGSC0003DMT400066409	Potato	cytosol	20.8	59.71
TraesCS1B01G206000.1	Wheat	cytosol	56.89	59.58
TraesCS1D01G194800.2	Wheat	cytosol	56.64	59.32
Zm00001d007746_P002	Maize	peroxisome	27.82	58.42
Solyc01g094090.2.1	Tomato	cytosol	48.12	58.36
GSMUA_Achr5P13900_001	Banana	cytosol	45.61	58.33
TraesCS1A01G190800.1	Wheat	plastid	56.64	57.65
GSMUA_Achr5P13870_001	Banana	cytosol	56.89	57.47
PGSC0003DMT400066419	Potato	cytosol	34.34	57.08
PGSC0003DMT400004521	Potato	cytosol	33.33	56.84
Zm00001d021132_P004	Maize	extracellular	57.39	56.68
PGSC0003DMT400004585	Potato	extracellular	37.84	56.55
GSMUA_Achr8P14800_001	Banana	cytosol	55.89	56.17
Zm00001d023779_P001	Maize	extracellular	53.63	55.44
KXG29172	Sorghum	peroxisome	52.38	54.01
OQU84058	Sorghum	mitochondrion	55.14	53.66
HORVU1Hr1G049960.6	Barley	mitochondrion	56.14	53.08
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	47.37	48.34
Zm00001d007740_P001	Maize	peroxisome	45.36	48.01
Zm00001d007732_P002	Maize	extracellular	34.09	47.72
Os12t0264500-02	Rice	endoplasmic reticulum	57.14	44.44
Bra003417.1-P	Field mustard	mitochondrion	42.86	42.75
GSMUA_Achr5P13890_001	Banana	nucleus	16.54	41.25
Zm00001d007728_P001	Maize	cytosol	14.54	40.85
Bra030657.1-P	Field mustard	cytosol	37.59	39.89
Bra010219.1-P	Field mustard	mitochondrion	40.85	39.76
Solyc01g108790.1.1	Tomato	nucleus	16.54	37.5
Bra010664.1-P	Field mustard	cytosol	18.3	35.61
Bra030656.1-P	Field mustard	cytosol	32.08	35.46
Bra032700.1-P	Field mustard	plastid	31.83	30.02
Bra001946.1-P	Field mustard	plastid	31.33	29.55
Bra030655.1-P	Field mustard	extracellular	11.78	26.26

Protein Annotations

EnsemblPlants:Bra039968.1	EnsemblPlants:Bra039968.1-P	EnsemblPlantsGene:Bra039968	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PFAM:PF16113
SUPFAM:SSF52096	UniParc:UPI000254422F	UniProt:M4FFU4	MapMan:50.3.1	:	:

Description

AT2G30660 (E=3e-102) | 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative

Coordinates

chrA04:+:13127620..13130247

Molecular Weight (calculated)

44579.3 Da

IEP (calculated)

8.606

GRAVY (calculated)

-0.120

Length

399 amino acids

Sequence
(BLAST)

001: MGSEPHSQVL VEETSSVRIL TLNRPKHLNA LSLNMITRLL QLFLAYEEDP SVKLVILKGQ GRAFCAGGDV PAIVRDIRLG KWRRSADFMS LGYNLHYVMA
101: TYCKAQVSIL NGIVMGVGVC VHGRFRIATE NTVFAMPETS LGIFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSTR LTALEADLCR
201: VGSSDPVTYA STILDAYTQH PHPKQKSACH RQIFNGNLCH QFLISINFSL CRLDVIDKCF SRRTVEEIIS ALEREATHKP DDWISATIGA LKKASPASLK
301: ISLRSIREGR LQGLGQCLIR ENRMVAHMMK GDISKDFVEG CRAILIDKDR NPKWDPRRLE DMKDNMVDKY FKRVEEEDGW EDLKLPPRKH LPASAIAKL

Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)

001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL

Arabidopsis Description

CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.