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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 4
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome, plastid
iPSORT:plastid
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:peroxisome
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003309_P002
Zm00001d009716_P001
Zm00001d011373_P002
Zm00001d013426_P002
Zm00001d016081_P002
Zm00001d016248_P001
Zm00001d033751_P003
Zm00001d038775_P002
Zm00001d043563_P002
Zm00001d044191_P004
Zm00001d046072_P001
Zm00001d053382_P002

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65940.1 Zm00001d013426_P002 AT1G14830.1 21798944
AT5G65940.1 Zm00001d033751_P003 AT1G14830.1 21798944
AT5G65940.1 Zm00001d003309_P002 AT2G42490.1 21798944
AT5G65940.1 Zm00001d016248_P001 AT2G42790.1 21798944
AT5G65940.1 Zm00001d009716_P001 AT4G01090.1 21798944
AT5G65940.1 Zm00001d011373_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d016081_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d044191_P004 AT4G01090.1 21798944
AT5G65940.1 Zm00001d046072_P001 AT4G01090.1 21798944
AT5G65940.1 Zm00001d053382_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d038775_P002 AT5G56630.1 21798944
AT5G65940.1 Zm00001d043563_P002 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007726_P001 Maize peroxisome 81.05 62.86
PGSC0003DMT400066411 Potato nucleus 45.79 59.59
PGSC0003DMT400066424 Potato cytosol, nucleus, plastid 19.47 54.41
CDY71268 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 40.53 51.68
PGSC0003DMT400066414 Potato cytosol 43.16 47.95
PGSC0003DMT400004521 Potato cytosol 52.63 42.73
Zm00001d007732_P002 Maize extracellular 62.63 41.75
Zm00001d021132_P004 Maize extracellular 79.47 37.38
OQU84058 Sorghum mitochondrion 80.0 37.07
TraesCS1D01G194800.2 Wheat cytosol 71.05 35.43
PGSC0003DMT400004585 Potato extracellular 49.47 35.21
KXG29172 Sorghum peroxisome 71.58 35.14
TraesCS1B01G206000.1 Wheat cytosol 70.0 34.91
TraesCS1A01G190800.1 Wheat plastid 71.05 34.44
Zm00001d023779_P001 Maize extracellular 67.89 33.42
GSMUA_Achr5P13890_001 Banana nucleus 27.89 33.12
CDY45442 Canola mitochondrion 57.37 32.93
Zm00001d007740_P001 Maize peroxisome 64.74 32.63
VIT_09s0002g07160.t01 Wine grape mitochondrion, peroxisome, plastid 62.63 32.16
HORVU1Hr1G049960.6 Barley mitochondrion 69.47 31.28
VIT_15s0045g01190.t01 Wine grape cytosol, nucleus, peroxisome 64.21 31.2
Solyc01g080930.2.1 Tomato cytosol 62.63 31.07
CDY57769 Canola peroxisome 60.53 30.83
Solyc01g108800.2.1 Tomato cytoskeleton, cytosol, peroxisome 61.05 30.61
AT5G65940.1 Thale cress peroxisome 60.53 30.42
CDY55104 Canola cytosol 59.47 30.05
Bra031802.1-P Field mustard cytosol 59.47 30.05
AT2G30650.1 Thale cress peroxisome 59.47 29.89
PGSC0003DMT400000043 Potato cytosol, mitochondrion, peroxisome 41.58 29.7
AT2G30660.1 Thale cress peroxisome 58.95 29.63
Solyc01g108790.1.1 Tomato nucleus 27.37 29.55
CDY31775 Canola peroxisome 57.89 28.72
KRH07311 Soybean nucleus 57.89 28.42
GSMUA_Achr8P14800_001 Banana cytosol 58.95 28.21
Bra018392.1-P Field mustard cytosol 54.74 27.96
Bra039968.1-P Field mustard peroxisome 58.42 27.82
CDY31769 Canola peroxisome 58.42 27.68
CDX97894 Canola peroxisome 56.32 27.58
CDY62818 Canola peroxisome 57.89 27.43
PGSC0003DMT400000054 Potato cytosol 55.26 27.34
GSMUA_Achr5P13870_001 Banana cytosol 56.84 27.34
CDY45439 Canola plastid 56.32 27.09
Os12t0264500-02 Rice endoplasmic reticulum 72.63 26.9
Bra018395.1-P Field mustard cytosol 51.58 26.27
PGSC0003DMT400066409 Potato cytosol 18.95 25.9
Bra039975.1-P Field mustard peroxisome 52.11 25.71
Solyc01g094090.2.1 Tomato cytosol 42.63 24.62
PGSC0003DMT400004567 Potato extracellular 14.74 21.21
Zm00001d029860_P001 Maize plasma membrane 44.74 20.94
GSMUA_Achr5P13900_001 Banana cytosol 33.68 20.51
Zm00001d043490_P001 Maize cytosol, extracellular 40.0 19.79
PGSC0003DMT400066419 Potato cytosol 17.89 14.17
Zm00001d046456_P009 Maize plastid 28.95 12.3
VIT_15s0045g01170.t01 Wine grape cytosol 4.74 6.16
Zm00001d007728_P001 Maize cytosol 2.63 3.52
Protein Annotations
EnsemblPlants:Zm00001d007746_P002EnsemblPlants:Zm00001d007746_T002EnsemblPlantsGene:Zm00001d007746Gene3D:3.90.226.10Gene3D:3.90.226.40GO:GO:0003674
GO:GO:0003824GO:GO:0003860GO:GO:0016787InterPro:ClpP/crotonase-like_dom_sfInterPro:HIBYL-CoA-HPANTHER:PTHR43176
PANTHER:PTHR43176:SF6PFAM:PF16113ProteinID:ONM27493.1SUPFAM:SSF52096UniParc:UPI000843CA35UniProt:A0A1D6F8I9
MapMan:35.1:::::
Description
3-hydroxyisobutyryl-CoA hydrolase 1
Coordinates
chr2:+:238683421..238685175
Molecular Weight (calculated)
21847.4 Da
IEP (calculated)
5.387
GRAVY (calculated)
-0.238
Length
190 amino acids
Sequence
(BLAST)
001: MQVFAMPETS LGLFPDVGAS YFLSRLPGFY GSLIPPIFIQ FKYMLEIINK CFSKRTVEEI ISSLEEVASI SASKWAAQTI QYMKKASPTS LKITSRSIRE
101: GRTQTIGECL QREYRMVCHV VRGDFSRDIF EGCRAILVDK DKNPKWMPPR LEQVHDDAVE EYFSRVDDPE WEDLDLPVMC SNGRIMESKL
Best Arabidopsis Sequence Match ( AT2G30650.1 )
(BLAST)
001: MASHSQVLVE EKSSVRILTF NRPKQLNALS FHMVSRLLQL FLAYEEDPSV KLVVLKGQGR AFSAGGDIPP IVRDILQGKL IRGAHYFKVG YTLNYVLSTY
101: RKPQVSILNG IVMGGGAGLS TNGRFRIATE NTVFAMPETA LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSIS LTALEAELYK
201: VGSSNQTFIS TILDAYAEYP HLNQHSSYHR LDVIDRCFSK RTVEEIFSAL EREVTQKPND WLLATIQALE KASPSCLKIS LRSIREGRLQ GVGQCLIREY
301: RMVCHVMKGD ISKDFVEGCR AVLIDKDRNP KWQPRRLEDV TDSMVDQYFE RVEDEEGWED LKFPPRNNLP ALAIAAKL
Arabidopsis Description
Probable 3-hydroxyisobutyryl-CoA hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEY5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.