Factsheet for Os12t0264500-02

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 4
endoplasmic reticulum 6
vacuole 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	peroxisome
PProwler:	secretory
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0621300-01
Os02t0232400-01
Os02t0258300-01
Os02t0593100-00
Os03t0713100-01
Os04t0136200-00
Os04t0476100-01
Os05t0524400-01
Os05t0586400-01
Os06t0524300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65940.1	Os03t0713100-01	AT1G14830.1	21798944
AT5G65940.1	Os02t0593100-00	AT2G42490.1	21798944
AT5G65940.1	Os04t0136200-00	AT2G42490.1	21798944
AT5G65940.1	Os04t0476100-01	AT2G42490.1	21798944
AT5G65940.1	Os02t0232400-01	AT2G42790.1	21798944
AT5G65940.1	Os01t0621300-01	AT4G01090.1	21798944
AT5G65940.1	Os02t0258300-01	AT4G01090.1	21798944
AT5G65940.1	Os05t0586400-01	AT4G01090.1	21798944
AT5G65940.1	Os06t0524300-01	AT4G01090.1	21798944
AT5G65940.1	Os05t0524400-01	AT5G56630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G194800.2	Wheat	cytosol	61.79	83.2
TraesCS1B01G206000.1	Wheat	cytosol	61.4	82.68
EER91893	Sorghum	cytosol	61.6	81.87
TraesCS1A01G190800.1	Wheat	plastid	61.6	80.61
Zm00001d021132_P004	Maize	extracellular	61.21	77.72
Zm00001d007726_P001	Maize	peroxisome	36.06	75.51
HORVU1Hr1G049960.6	Barley	mitochondrion	60.82	73.93
Zm00001d007746_P002	Maize	peroxisome	26.9	72.63
KXG29172	Sorghum	peroxisome	54.0	71.58
OQU84058	Sorghum	mitochondrion	56.73	70.98
Zm00001d023779_P001	Maize	extracellular	52.63	69.95
GSMUA_Achr5P13900_001	Banana	cytosol	39.38	64.74
PGSC0003DMT400066414	Potato	cytosol	21.25	63.74
Solyc01g080930.2.1	Tomato	cytosol	47.56	63.71
CDY57769	Canola	peroxisome	46.2	63.54
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	45.81	63.51
CDY55104	Canola	cytosol	46.2	63.03
Bra031802.1-P	Field mustard	cytosol	46.2	63.03
AT5G65940.1	Thale cress	peroxisome	46.39	62.96
PGSC0003DMT400004567	Potato	extracellular	16.18	62.88
GSMUA_Achr8P14800_001	Banana	cytosol	48.54	62.72
PGSC0003DMT400066409	Potato	cytosol	16.96	62.59
KRH07311	Soybean	nucleus	47.17	62.53
PGSC0003DMT400066411	Potato	nucleus	17.74	62.33
GSMUA_Achr5P13870_001	Banana	cytosol	47.95	62.28
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	46.0	62.27
AT2G30660.1	Thale cress	peroxisome	45.61	61.9
VIT_15s0045g01170.t01	Wine grape	cytosol	17.54	61.64
Zm00001d007740_P001	Maize	peroxisome	44.83	61.01
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	7.99	60.29
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	31.19	60.15
Solyc01g094090.2.1	Tomato	cytosol	38.21	59.57
AT2G30650.1	Thale cress	peroxisome	43.66	59.26
CDY31775	Canola	peroxisome	44.05	59.01
PGSC0003DMT400000054	Potato	cytosol	43.66	58.33
CDX97894	Canola	peroxisome	44.05	58.25
CDY62818	Canola	peroxisome	45.42	58.1
Bra018392.1-P	Field mustard	cytosol	42.11	58.06
CDY31769	Canola	peroxisome	44.83	57.36
Bra039968.1-P	Field mustard	peroxisome	44.44	57.14
Bra018395.1-P	Field mustard	cytosol	41.33	56.84
CDY45442	Canola	mitochondrion	36.45	56.5
PGSC0003DMT400004521	Potato	cytosol	25.73	56.41
Zm00001d007728_P001	Maize	cytosol	15.4	55.63
Bra039975.1-P	Field mustard	peroxisome	41.72	55.58
PGSC0003DMT400004585	Potato	extracellular	28.66	55.06
Zm00001d007732_P002	Maize	extracellular	30.41	54.74
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	15.79	54.36
PGSC0003DMT400066419	Potato	cytosol	25.34	54.17
CDY45439	Canola	plastid	41.52	53.92
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	37.04	48.59
GSMUA_Achr5P13890_001	Banana	nucleus	13.84	44.38
Os01t0752200-01	Rice	plasma membrane	29.82	39.33
Os10t0552900-01	Rice	mitochondrion	31.38	39.17
Solyc01g108790.1.1	Tomato	nucleus	12.87	37.5
Os06t0594100-01	Rice	mitochondrion	23.59	27.88

Protein Annotations

Gene3D:3.90.226.40	MapMan:4.2.7.4	MapMan:4.2.7.6.1	UniProt:A0A0P0Y8U1	ProteinID:BAT16603.1	InterPro:ClpP/crotonase-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0003860	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	InterPro:HIBYL-CoA-H	EnsemblPlantsGene:Os12g0264500	EnsemblPlants:Os12t0264500-02	PFAM:PF16113	PANTHER:PTHR43176
SUPFAM:SSF52096	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000393B297	SEG:seg	:

Description

Similar to CoA-thioester hydrolase CHY1 (3-hydroxyisobutyryl-coenzyme A hydrolase). (Os12t0264500-01);Similar to CHY1. (Os12t0264500-02);Conserved hypothetical protein. (Os12t0264500-03);Similar to cDNA clone:J013000A22, full insert sequence. (Os12t0264500-04)

Coordinates

chr12:+:9353527..9365572

Molecular Weight (calculated)

56810.2 Da

IEP (calculated)

6.216

GRAVY (calculated)

-0.213

Length

513 amino acids

Sequence
(BLAST)

001: EKERKNTTRP LLLSFFLLLC FLLPPYYSVS VRSPVSIEEV EAAPDANGGG EEANRPRVEG DGEGVLQSNE SSAKVDEPVA TENSDAAPAE ASVDAVNGKI
101: PPTKLIPQHP LEGVTLTERT VRITGNKKQI EAAKDIIKQA MSQVLVEANG VTRTLVLNRP KQLNALSSAM ITCFLRCFTA YEEDDGVKLL IVKGKGRAFC
201: AGGDVAAVVR SINNDSWKYG AHFFRNEFLL NYIIATYSKP QVSLLTGIVM GGGAGVSIHG RFRVVTDSTV FAMPETALGL FPDIGASYFL SRLLGFYGEY
301: VGLTGVRLDA AEMLACGLAT HFVPSDRLSL LEESLKKVDT SDPFAICGII DQYSQQPSLK EKSALNRLEI INKCFSKKTV EEIIASLEQE APNVADEWIA
401: SAIQSMRKAS PTSMKISLRS IREGRTQTVG ECLRREYRMV CHVMRGDFSR DFFEGCRAIL LDRDRNPKWM PPRLEEVHDE VVEKYFSKVD DPEWEDLDLP
501: PRRSHGRRLV PKL

Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)

001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL

Arabidopsis Description

CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.