Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G459600.2 | Wheat | plastid | 57.69 | 57.25 |
| KXG22639 | Sorghum | nucleus | 57.18 | 56.31 |
| TraesCS1D01G434200.2 | Wheat | nucleus | 56.28 | 56.14 |
| TraesCS1A01G425200.2 | Wheat | nucleus | 55.77 | 55.27 |
| Zm00001d009716_P001 | Maize | nucleus | 51.54 | 52.62 |
| HORVU1Hr1G092980.14 | Barley | plastid | 57.69 | 51.31 |
| Os01t0621300-01 | Rice | nucleus | 46.92 | 45.35 |
| Bra037384.1-P | Field mustard | nucleus | 12.44 | 42.36 |
| CDX79176 | Canola | cytosol | 5.38 | 37.17 |
| CDY15177 | Canola | nucleus | 20.26 | 28.37 |
| CDY48504 | Canola | nucleus | 20.38 | 28.24 |
| CDX90032 | Canola | nucleus | 19.62 | 27.32 |
| Bra000943.1-P | Field mustard | nucleus | 19.87 | 25.83 |
| Bra033264.1-P | Field mustard | nucleus | 19.23 | 25.82 |
| CDY67475 | Canola | nucleus | 19.36 | 25.55 |
| CDX91876 | Canola | nucleus | 19.1 | 25.51 |
| CDY42041 | Canola | cytosol | 20.38 | 24.61 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 21.79 | 24.57 |
| CDY07174 | Canola | nucleus | 19.87 | 24.37 |
| CDX80013 | Canola | nucleus | 20.77 | 24.36 |
| CDX71720 | Canola | cytosol | 23.08 | 24.32 |
| Bra004541.1-P | Field mustard | nucleus | 20.9 | 24.29 |
| CDY11374 | Canola | cytosol | 22.69 | 23.89 |
| Bra007625.1-P | Field mustard | cytosol | 22.69 | 23.89 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 23.72 | 23.69 |
| CDY11373 | Canola | cytosol | 21.92 | 23.33 |
| AT2G46380.1 | Thale cress | nucleus | 22.69 | 23.05 |
| AT4G01090.1 | Thale cress | nucleus | 20.77 | 22.69 |
| AT1G01440.1 | Thale cress | nucleus | 19.23 | 22.59 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 24.23 | 22.26 |
| AT3G61670.1 | Thale cress | nucleus | 22.18 | 21.9 |
| Os02t0258300-01 | Rice | nucleus | 23.33 | 21.62 |
| Os06t0524300-01 | Rice | nucleus | 22.05 | 21.21 |
| KRG97141 | Soybean | nucleus | 23.72 | 20.31 |
| Solyc08g082040.2.1 | Tomato | nucleus | 23.97 | 19.79 |
| PGSC0003DMT400032053 | Potato | nucleus | 23.97 | 19.77 |
| KRH68892 | Soybean | nucleus | 22.69 | 19.58 |
| KRH06502 | Soybean | nucleus | 22.31 | 19.51 |
| KRH47938 | Soybean | nucleus | 21.79 | 19.02 |
| Solyc01g095590.2.1 | Tomato | nucleus | 22.82 | 18.41 |
| PGSC0003DMT400000290 | Potato | nucleus | 22.69 | 17.63 |
| KRG99688 | Soybean | cytosol | 0.51 | 5.88 |
Protein Annotations
| EnsemblPlants:Os05t0586400-01 | EnsemblPlantsGene:Os05g0586400 | EntrezGene:4339757 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF8 |
| PFAM:PF11331 | ProteinID:AAT44152.1 | ProteinID:BAF18375.1 | ProteinID:BAS95577.1 | ProteinID:EEE64859.1 | RefSeq:XP_015637727.1 |
| SEG:seg | UniParc:UPI00003A9220 | UniProt:Q6L5C9 | MapMan:35.2 | : | : |
Description
Protein of unknown function DUF3133 domain containing protein. (Os05t0586400-01)
Coordinates
chr5:+:29213560..29219599
Molecular Weight (calculated)
87562.1 Da
IEP (calculated)
8.231
GRAVY (calculated)
-0.856
Length
780 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEAKEMKY RRRARVPEPF DYGQCGGDRS GVLDWGALKE NPVELLRKLD ELRDHITRSC EITDQPRERH RMSRRTASLR PSHAEPPPLG RGPEHYRSRY
101: TGRYGSGFPH SPNDQLHRSM HRDRYERQPS GRFRQWPERQ WENSGYLGGN HHQSTCQCAQ CLHGQRAVMQ EEHIPMTRYF AGQQGSHLFD RSPSVSSELD
201: RRSVASSLYS HFSVSKRRTE FFRKKAESFC RPVRGAAPFV VCSSCNQLLQ LPPGKCTARK QIQVRCGSCS EIVSFKLKEV KIHPLVAPTS FPASKTVGSS
301: SRQVNKSFGW YQHQDEGNSS FHKLQAQERW QQNKDLADNI SVSSTSSYDR IDKECGSNRS SQLLSVSVRR SRLANIPKDI LCQGDAYSQV ETSAFNTGNL
401: QAPVIEDKCV DPFSSRLKDC SGGDRTSKEC SLNIMADSVD ANVRDERSDV TYEQNSKDHK EGFGEETVSS RHEQKLKEST SGFCDDGSMG NIDKLTADND
501: DTSSLEDGDV SKKYEEKIKQ DDNNFQSEFI TERYSKCSKE DNNSVIQVET IATICKQDDL DDCYSELLSP NSEHAIMPSK LESSVNERTN SSSRVSSEAE
601: LDEVQSAATK NGDSKFFAGF LKKGLKDISL FNQSVDSAKV SINGHSISER VLRKAEKKSG PVGPGSYWYD YRAGFWGVMG HECSGIIPPF IKEFNYPMPK
701: NCAGGNTGVI VNGRELHQKD FELLAGRGLP RISGKSYSVE INGNVIDETT GKKLRKLGKL APTVEKLKRG FGMHVPEEKS
101: TGRYGSGFPH SPNDQLHRSM HRDRYERQPS GRFRQWPERQ WENSGYLGGN HHQSTCQCAQ CLHGQRAVMQ EEHIPMTRYF AGQQGSHLFD RSPSVSSELD
201: RRSVASSLYS HFSVSKRRTE FFRKKAESFC RPVRGAAPFV VCSSCNQLLQ LPPGKCTARK QIQVRCGSCS EIVSFKLKEV KIHPLVAPTS FPASKTVGSS
301: SRQVNKSFGW YQHQDEGNSS FHKLQAQERW QQNKDLADNI SVSSTSSYDR IDKECGSNRS SQLLSVSVRR SRLANIPKDI LCQGDAYSQV ETSAFNTGNL
401: QAPVIEDKCV DPFSSRLKDC SGGDRTSKEC SLNIMADSVD ANVRDERSDV TYEQNSKDHK EGFGEETVSS RHEQKLKEST SGFCDDGSMG NIDKLTADND
501: DTSSLEDGDV SKKYEEKIKQ DDNNFQSEFI TERYSKCSKE DNNSVIQVET IATICKQDDL DDCYSELLSP NSEHAIMPSK LESSVNERTN SSSRVSSEAE
601: LDEVQSAATK NGDSKFFAGF LKKGLKDISL FNQSVDSAKV SINGHSISER VLRKAEKKSG PVGPGSYWYD YRAGFWGVMG HECSGIIPPF IKEFNYPMPK
701: NCAGGNTGVI VNGRELHQKD FELLAGRGLP RISGKSYSVE INGNVIDETT GKKLRKLGKL APTVEKLKRG FGMHVPEEKS
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.