Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003473.1-P
Bra004436.1-P
Bra004904.1-P
Bra008613.1-P
Bra009045.1-P
Bra014421.1-P
Bra015721.1-P
Bra017974.1-P
Bra023570.1-P
Bra023825.1-P
Bra023895.1-P
Bra034024.1-P
Bra034027.1-P
Bra034029.1-P
Bra038762.1-P
Bra040314.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01440.1 Bra034024.1-P AT1G67090.1 21798944
AT1G01440.1 Bra034027.1-P AT1G67090.1 21798944
AT1G01440.1 Bra034029.1-P AT1G67090.1 21798944
AT1G01440.1 Bra015721.1-P AT1G76760.1 21798944
AT1G01440.1 Bra004904.1-P AT2G45360.1 21798944
AT1G01440.1 Bra040314.1-P AT2G45360.1 21798944
AT1G01440.1 Bra004436.1-P AT2G47700.1 21798944
AT1G01440.1 Bra023895.1-P AT3G21215.1 21798944
AT1G01440.1 Bra023825.1-P AT3G22440.1 21798944
AT1G01440.1 Bra017974.1-P AT3G49580.1 21798944
AT1G01440.1 Bra003473.1-P AT3G61790.1 21798944
AT1G01440.1 Bra014421.1-P AT3G61790.1 21798944
AT1G01440.1 Bra038762.1-P AT4G21705.1 21798944
AT1G01440.1 Bra009045.1-P AT5G10270.1 21798944
AT1G01440.1 Bra008613.1-P AT5G16560.1 21798944
AT1G01440.1 Bra023570.1-P AT5G16560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90032 Canola nucleus 75.9 78.75
CDY15177 Canola nucleus 73.84 77.02
Bra037384.1-P Field mustard nucleus 24.96 63.32
AT1G01440.1 Thale cress nucleus 57.14 50.0
Bra000943.1-P Field mustard nucleus 44.75 43.33
Bra004541.1-P Field mustard nucleus 29.09 25.19
Bra007625.1-P Field mustard cytosol 30.29 23.75
GSMUA_Achr10P... Banana nucleus 29.6 22.9
GSMUA_Achr7P14150_001 Banana nucleus 29.09 22.3
GSMUA_Achr10P... Banana nucleus 29.78 22.07
GSMUA_Achr10P... Banana cytosol 28.57 21.39
GSMUA_Achr3P25070_001 Banana vacuole 25.13 21.1
Os02t0258300-01 Rice nucleus 30.46 21.02
Zm00001d053382_P002 Maize nucleus 29.26 20.61
TraesCS7B01G276600.1 Wheat nucleus 28.4 19.93
TraesCS7A01G351500.1 Wheat nucleus 28.23 19.93
TraesCS7D01G371500.1 Wheat nucleus 28.23 19.83
KXG22639 Sorghum nucleus 27.02 19.82
Zm00001d016081_P002 Maize nucleus 28.92 19.72
TraesCS1D01G434200.2 Wheat nucleus 26.51 19.69
Os06t0524300-01 Rice nucleus 27.37 19.61
TraesCS1B01G459600.2 Wheat plastid 26.51 19.59
KXG29961 Sorghum nucleus 29.09 19.56
TraesCS7B01G247600.1 Wheat cytosol 28.23 19.5
EER88427 Sorghum nucleus 26.68 19.47
TraesCS7A01G336000.1 Wheat nucleus 28.57 19.46
Os01t0621300-01 Rice nucleus 27.02 19.45
HORVU3Hr1G055550.3 Barley nucleus 26.51 19.42
TraesCS3D01G229400.1 Wheat nucleus 26.51 19.32
TraesCS7D01G343700.1 Wheat cytosol 28.23 19.32
HORVU0Hr1G021800.1 Barley nucleus 27.02 19.26
Os05t0586400-01 Rice nucleus 25.82 19.23
TraesCS3B01G253700.2 Wheat nucleus 26.33 19.22
Zm00001d046072_P001 Maize cytosol 26.68 19.21
TraesCS1A01G425200.2 Wheat nucleus 25.82 19.06
EES03295 Sorghum nucleus 26.16 19.05
Zm00001d044191_P004 Maize nucleus 25.82 18.89
Zm00001d011373_P002 Maize nucleus 25.65 18.37
Zm00001d009716_P001 Maize nucleus 23.92 18.19
HORVU7Hr1G082720.10 Barley cytosol, nucleus 26.33 17.92
TraesCS3A01G224200.2 Wheat nucleus 25.65 17.87
HORVU1Hr1G092980.14 Barley plastid 26.68 17.67
Protein Annotations
EnsemblPlants:Bra033264.1EnsemblPlants:Bra033264.1-PEnsemblPlantsGene:Bra033264InterPro:Zinc_ribbon_12PANTHER:PTHR31105PANTHER:PTHR31105:SF3
PFAM:PF11331SEG:segUniParc:UPI0002545158UniProt:M4EWS9MapMan:35.2:
Description
AT1G01440 (E=2e-115) | extra-large G-protein-related
Coordinates
chrA10:-:4608552..4610557
Molecular Weight (calculated)
64952.4 Da
IEP (calculated)
7.286
GRAVY (calculated)
-0.897
Length
581 amino acids
Sequence
(BLAST)
001: MRTSGSASSR SQEETRFKEE DDASPRRNRQ DQNTIPIQYA DQQQAELFRK LDSLKGHVLR GQDSPRASHH QPPPYYNPYP PYGMYPSPSN PPHGFPMHQS
101: LYGHYPNQML PRPPYPPQGG HYVDIGPDIL DPQLHDPRFF PGTPSRYADV PVSHHGGGAQ GHHHKRWPSD INSEMGSGAQ GHHHTRRPSE VNSEMGGGAY
201: ARGYVQTAAD SRRCHPLAGG APFVACHNCF ELLYLPRKKL LLSQAKQQQK LQCGACSEVF SFTIVDNKLV FSSSSALEES HRARVEVEDR SAVIDDCPLK
301: DEEHSDDEGG RSSVSSEPQK EVVKSVRRRA KAAKAPPPPP PPENSNLLEL FEYSNVNRAA LTYGMSQLGY NKQVSFTKQE SVASETDISY NGYYNNTEDD
401: SRISNASKDE RGRRNRKHRS DYNKTVSNDD QYDRQLEVWV NGHLIPEDQV ISAEKQAGPV QAGNYWYDYR AGFWGVMGHP CLGIIPPFIE EFSRPMPDNC
501: GAGNTGVFVN GRELHERDFE LLSGRGLPRG KNRSYIVDIS GRVLDGDSGE ELKSLGKLAP TIEKVKHGFG MRVPRYLASS T
Best Arabidopsis Sequence Match ( AT1G01440.1 )
(BLAST)
001: MRTSGDVYGA DTGSSRSDED RGFKEDLNES ATSPMRNRLD DSNSRPGSQR FVKSSRKEEE TDSDSSSSKN TTTRNNPIQY TDKQQAELLR KLDSIKDHLL
101: RGGGNNATVV DQPPMGFHAH HGPPPSYYNP YPEPFPYGMY PTASNQPHVP AYRDPYGFPV HRIPQNFYQG PSHYPNQMPP RPPYPQGQYV DIGSDILESQ
201: LQDPRFFPGT PSRYGDVPFS PALHHGEKVG PFSPHGGVHT RWPSEIDSEM GGAFARGYVQ QAVSDTDSRR CHPLAGGAPF IACHSCFELL YVPKKKLLGQ
301: ERQQKMQCGA CSEVITFRVV DKKLVFSSSA LGETTNRVSV EVEDRSSPIP VVDDYPLNDE EPRIHQETKI VHAVSPSDHS NDEDRSSISS EPRKQVVKSV
401: RSRAQGAKVP PPPPPEKSNL LELFEYSNVN RAAITYGMAQ LGYYKQESYT KQDSLKSESV ATETDVSYNE YYTNTEESED SRISKASKEG RRPRNRKQSS
501: EHSFAEVTNN ISSNDQNNEQ LEVWVNGYLI PEDLVISAEK QAGPVQAGKY WYDYRAGFWG VMGNPCLGII PPFIEEFSRP MPDNCGAGNT SVFVNGRELH
601: ERDLELLSSR GLPRGKNRSY IIDIAGRVLD GDSGEELKSL GRLAPTVDKV KHGFGMRVPR SLVS
Arabidopsis Description
At1g01440 [Source:UniProtKB/TrEMBL;Acc:Q6NQ63]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.