Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G247600.1 | Wheat | cytosol | 95.88 | 96.79 |
| TraesCS7A01G336000.1 | Wheat | nucleus | 96.23 | 95.78 |
| HORVU7Hr1G082720.10 | Barley | cytosol, nucleus | 87.16 | 86.65 |
| Os02t0258300-01 | Rice | nucleus | 69.38 | 69.95 |
| KXG29961 | Sorghum | nucleus | 66.55 | 65.39 |
| Zm00001d016081_P002 | Maize | nucleus | 64.78 | 64.55 |
| Zm00001d053382_P002 | Maize | nucleus | 61.84 | 63.64 |
| TraesCS7D01G371500.1 | Wheat | nucleus | 51.59 | 52.96 |
| Bra037384.1-P | Field mustard | nucleus | 11.54 | 42.79 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 37.22 | 41.69 |
| KRG99688 | Soybean | cytosol | 3.3 | 41.18 |
| GSMUA_Achr10P... | Banana | nucleus | 37.57 | 40.69 |
| GSMUA_Achr10P... | Banana | cytosol | 36.4 | 39.82 |
| GSMUA_Achr10P... | Banana | nucleus | 33.45 | 37.82 |
| CDX79176 | Canola | cytosol | 4.95 | 37.17 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 32.86 | 32.86 |
| CDY42041 | Canola | cytosol | 24.62 | 32.35 |
| CDX71720 | Canola | cytosol | 27.56 | 31.62 |
| Bra004541.1-P | Field mustard | nucleus | 24.73 | 31.3 |
| CDY11374 | Canola | cytosol | 27.09 | 31.04 |
| CDX80013 | Canola | nucleus | 24.26 | 30.98 |
| Bra007625.1-P | Field mustard | cytosol | 26.86 | 30.77 |
| CDY11373 | Canola | cytosol | 25.91 | 30.01 |
| AT3G61670.1 | Thale cress | nucleus | 27.92 | 30.0 |
| AT2G46380.1 | Thale cress | nucleus | 26.74 | 29.56 |
| Bra033264.1-P | Field mustard | nucleus | 19.32 | 28.23 |
| CDX90032 | Canola | nucleus | 18.61 | 28.21 |
| KRH68892 | Soybean | nucleus | 30.04 | 28.21 |
| CDY15177 | Canola | nucleus | 18.49 | 28.19 |
| KRG97141 | Soybean | nucleus | 30.04 | 27.99 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 25.21 | 27.4 |
| CDY48504 | Canola | nucleus | 18.14 | 27.35 |
| CDX91876 | Canola | nucleus | 18.73 | 27.23 |
| KRH06502 | Soybean | nucleus | 28.39 | 27.02 |
| KRH47938 | Soybean | nucleus | 27.68 | 26.29 |
| CDY67475 | Canola | nucleus | 18.26 | 26.23 |
| PGSC0003DMT400032053 | Potato | nucleus | 28.98 | 26.0 |
| Bra000943.1-P | Field mustard | nucleus | 18.37 | 26.0 |
| Solyc08g082040.2.1 | Tomato | nucleus | 28.86 | 25.93 |
| PGSC0003DMT400000290 | Potato | nucleus | 29.8 | 25.2 |
| Solyc01g095590.2.1 | Tomato | nucleus | 28.62 | 25.13 |
| CDY07174 | Canola | nucleus | 18.73 | 25.0 |
| AT1G01440.1 | Thale cress | nucleus | 18.85 | 24.1 |
| TraesCS1D01G434200.2 | Wheat | nucleus | 21.79 | 23.66 |
| AT4G01090.1 | Thale cress | nucleus | 19.55 | 23.25 |
| TraesCS3D01G229400.1 | Wheat | nucleus | 20.73 | 22.08 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G343700.1 | EnsemblPlantsGene:TraesCS7D01G343700 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF7 |
| PFAM:PF11331 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:+:440006793..440011884
Molecular Weight (calculated)
93589.8 Da
IEP (calculated)
7.387
GRAVY (calculated)
-0.657
Length
849 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSEGSGAS CSAAAAAAAE QQVRVVRCPK CEKFLPELPN YSVYVCGGCG ATLQAKKHSA PETTCLDKTD VVHVKYLEVL ESSPEKKEPV SEANFETISE
101: ENSQRVQATP EERLVTQRMM PEHRDSRCSS GDDQIPREPS TLMFEATLRD DSTEIREAKY RRIRNEEKGE VKQPVRPSDR SHISVVDTIP PNAYHGEHQM
201: KSSFGDANGT QCADGRNMDG PSSVSGLEKD RAELLRMLDE LRDQVQRSCE ITEKPSVGAS TGRVVDASSS YSPHELLSRL RHGSSQLQRN GSQCSPSLSG
301: QNPGVPHAYA SVPTHQDLRG YREPATHMGA PCYPVGQYPW RNYDSYFFGQ HNHDPLVSYH HGGFYHQPAC SCLHCHHREF LPVQGAPMGF NHHRVPYPGA
401: YPVNGSVMFG MQNNNSRGIN ASMHRGHMRG NLSKKPPQTC EPIACGAPFT ICYNCYEVLQ LPKKCPLPGK DEYKLRCGSC SHVIVVKLDG SRLDVSAPSP
501: ISHVSAASRN NSSDVQGSNA YSATDERLLP LYSFSAGSHC SRERDLHSNS SDAEKVQGIS LSSSIFEDEN NLARSNSQRG TPRSSDLPVE AQVVSRVPSL
601: PLQHHFAHSP SERVVNGSGK GSRSTRSEHE KTVLTETCRH NTIKDVRVVS VMSLSDDEYE DLDCSQDPGV GAQHVDRPIV TKTGDSFFTN LMKKSFKINN
701: GVGNGRAKVF INGYPISDRA VKKAEKIAGP IYPGEYWYDY RAGFWGVMGQ SCLGMIPPFI PQLNYPMPKN CAGGNTGIFI NGRELHQKDF DLLVGRGLSE
801: SPDRSYKVEM SGKVYDDVSG EELYCLGKLA PTVEKMKRGF GMRPPRTIH
101: ENSQRVQATP EERLVTQRMM PEHRDSRCSS GDDQIPREPS TLMFEATLRD DSTEIREAKY RRIRNEEKGE VKQPVRPSDR SHISVVDTIP PNAYHGEHQM
201: KSSFGDANGT QCADGRNMDG PSSVSGLEKD RAELLRMLDE LRDQVQRSCE ITEKPSVGAS TGRVVDASSS YSPHELLSRL RHGSSQLQRN GSQCSPSLSG
301: QNPGVPHAYA SVPTHQDLRG YREPATHMGA PCYPVGQYPW RNYDSYFFGQ HNHDPLVSYH HGGFYHQPAC SCLHCHHREF LPVQGAPMGF NHHRVPYPGA
401: YPVNGSVMFG MQNNNSRGIN ASMHRGHMRG NLSKKPPQTC EPIACGAPFT ICYNCYEVLQ LPKKCPLPGK DEYKLRCGSC SHVIVVKLDG SRLDVSAPSP
501: ISHVSAASRN NSSDVQGSNA YSATDERLLP LYSFSAGSHC SRERDLHSNS SDAEKVQGIS LSSSIFEDEN NLARSNSQRG TPRSSDLPVE AQVVSRVPSL
601: PLQHHFAHSP SERVVNGSGK GSRSTRSEHE KTVLTETCRH NTIKDVRVVS VMSLSDDEYE DLDCSQDPGV GAQHVDRPIV TKTGDSFFTN LMKKSFKINN
701: GVGNGRAKVF INGYPISDRA VKKAEKIAGP IYPGEYWYDY RAGFWGVMGQ SCLGMIPPFI PQLNYPMPKN CAGGNTGIFI NGRELHQKDF DLLVGRGLSE
801: SPDRSYKVEM SGKVYDDVSG EELYCLGKLA PTVEKMKRGF GMRPPRTIH
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.