CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80013	Canola	nucleus	88.85	86.32
AT2G46380.1	Thale cress	nucleus	63.16	53.12
KRG99688	Soybean	cytosol	5.11	48.53
CDX79176	Canola	cytosol	7.43	42.48
CDX71720	Canola	cytosol	46.28	40.41
CDY11374	Canola	cytosol	45.82	39.95
CDY11373	Canola	cytosol	42.88	37.79
CDY48504	Canola	nucleus	26.16	30.02
CDX91876	Canola	nucleus	27.09	29.97
CDX90032	Canola	nucleus	25.85	29.82
CDY15177	Canola	nucleus	25.54	29.62
CDY67475	Canola	nucleus	26.32	28.76
KRG97141	Soybean	nucleus	40.25	28.54
GSMUA_Achr10P...	Banana	nucleus	33.13	28.5
KRH68892	Soybean	nucleus	39.47	28.21
GSMUA_Achr10P...	Banana	nucleus	34.06	28.06
GSMUA_Achr7P14150_001	Banana	nucleus	32.51	27.7
CDY07174	Canola	nucleus	26.47	26.89
VIT_15s0046g01270.t01	Wine grape	nucleus	32.35	26.76
GSMUA_Achr10P...	Banana	cytosol	31.89	26.55
KRH06502	Soybean	nucleus	36.53	26.46
GSMUA_Achr3P25070_001	Banana	vacuole	28.33	26.45
KRH47938	Soybean	nucleus	36.38	26.29
TraesCS7A01G336000.1	Wheat	nucleus	32.97	24.97
Zm00001d053382_P002	Maize	nucleus	31.89	24.97
TraesCS7B01G247600.1	Wheat	cytosol	32.35	24.85
Os02t0258300-01	Rice	nucleus	32.35	24.82
EER88427	Sorghum	nucleus	30.5	24.75
TraesCS7A01G351500.1	Wheat	nucleus	31.42	24.67
TraesCS7B01G276600.1	Wheat	nucleus	31.58	24.64
TraesCS7D01G343700.1	Wheat	cytosol	32.35	24.62
Zm00001d016081_P002	Maize	nucleus	32.2	24.41
Zm00001d046072_P001	Maize	cytosol	30.5	24.41
KXG29961	Sorghum	nucleus	32.51	24.31
TraesCS7D01G371500.1	Wheat	nucleus	31.11	24.3
Os06t0524300-01	Rice	nucleus	30.19	24.04
HORVU0Hr1G021800.1	Barley	nucleus	30.19	23.93
PGSC0003DMT400000290	Potato	nucleus	36.22	23.31
HORVU7Hr1G082720.10	Barley	cytosol, nucleus	30.5	23.07
Solyc01g095590.2.1	Tomato	nucleus	34.06	22.75
EES03295	Sorghum	nucleus	26.16	21.18
Os01t0621300-01	Rice	nucleus	26.32	21.07
TraesCS1B01G459600.2	Wheat	plastid	25.39	20.87
Zm00001d044191_P004	Maize	nucleus	25.39	20.65
TraesCS3B01G253700.2	Wheat	nucleus	25.39	20.6
TraesCS1D01G434200.2	Wheat	nucleus	24.92	20.59
Os05t0586400-01	Rice	nucleus	24.61	20.38
Zm00001d011373_P002	Maize	nucleus	25.54	20.35
TraesCS1A01G425200.2	Wheat	nucleus	24.61	20.2
KXG22639	Sorghum	nucleus	24.77	20.2
TraesCS3D01G229400.1	Wheat	nucleus	24.77	20.08
HORVU3Hr1G055550.3	Barley	nucleus	24.15	19.67
Zm00001d009716_P001	Maize	nucleus	22.6	19.11
HORVU1Hr1G092980.14	Barley	plastid	25.54	18.81
TraesCS3A01G224200.2	Wheat	nucleus	23.53	18.23

Protein Annotations

EnsemblPlants:CDY42041	EnsemblPlantsGene:GSBRNA2T00074057001	InterPro:Zinc_ribbon_12	ncoils:Coil	PANTHER:PTHR31105	PANTHER:PTHR31105:SF3
PFAM:PF11331	ProteinID:CDY42041	ProteinID:CDY42041.1	SEG:seg	UniParc:UPI0004EEEE93	UniProt:A0A078HWF4
MapMan:35.2	:	:	:	:	:

Description

BnaC04g01190DBnaC04g01190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWF4]

Coordinates

chrLK032512:+:244659..246911

Molecular Weight (calculated)

71695.0 Da

IEP (calculated)

8.282

GRAVY (calculated)

-0.741

Length

646 amino acids

Sequence
(BLAST)

001: MAESTIEVKL VRCPKCKNLL PEPKDCSFFQ CGGCGTVLCA KNKDREADPV PDNSVKTRAK ETEVNSCSSE EESDSDDDSS RHNQTGQTDV PCSKQNVVSG
101: SQSGLDRSFR FSASNYFQDS VSSDEAIQQD RAELVKKLDK LKEQLHQPKE QQIPRSSKKA PLRFPSSGKH LAGPYYHQTH HHYSRQYTSN NGHDLFNTHQ
201: GNGMLLHQST CSCFHCYDPY HRASGSVYPP SGLPDALHNI GFYPYERSTA FPSPLHSPRS FIPPYPPASQ SRGHCKPSRA VSSSGGSRLV HPVAGGAPFI
301: NCKKCSKILK LPDKTDSATR KQQRLRCGAC SCLIDFSFAD KKLILSTDPA SAREEEEETL SRLHWLTALD VSCLDYVSTG PASPSFSEDE LSSDSQTGRK
401: LIPDLPFYSS INVKDRSGAR SQSSRSEQNK VLLSKTVKRQ NSMKEASVLI EMDVNDYSHN NGVSQDSGDD YREEDGRTRK GGFASMVKSS FNDLKKSMQN
501: GGGSDVLVNG HLVAERLVKM AEKQAGPIRP GNYWYDYRAG FWGVMGGQCL GILPPFIEEL NYPMPENCSG GNTRVFVNGR ELHQKDLRLL IARGLPRDRD
601: RSYTVYITGR VIDEDTGEEL NSLGKLAPTV DKLKRGFGMR VPRRYA

Best Arabidopsis Sequence Match ( AT2G46380.1 )
(BLAST)

001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT

Arabidopsis Description

Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.