CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68892	Soybean	nucleus	91.55	92.26
KRG99688	Soybean	cytosol	4.94	66.18
KRH06502	Soybean	nucleus	63.78	65.13
KRH47938	Soybean	nucleus	62.35	63.53
VIT_15s0046g01270.t01	Wine grape	nucleus	42.26	49.3
CDX71720	Canola	cytosol	33.59	41.35
CDY11373	Canola	cytosol	33.15	41.2
AT3G61670.1	Thale cress	nucleus	35.68	41.14
AT2G46380.1	Thale cress	nucleus	34.58	41.02
CDY11374	Canola	cytosol	33.04	40.62
Bra007625.1-P	Field mustard	cytosol	32.93	40.49
CDY42041	Canola	cytosol	28.54	40.25
CDX80013	Canola	nucleus	28.54	39.1
Bra004541.1-P	Field mustard	nucleus	28.76	39.05
PGSC0003DMT400000290	Potato	nucleus	41.05	37.25
Solyc01g095590.2.1	Tomato	nucleus	39.52	37.23
GSMUA_Achr10P...	Banana	cytosol	30.3	35.57
GSMUA_Achr10P...	Banana	nucleus	29.86	34.69
GSMUA_Achr10P...	Banana	nucleus	28.54	34.62
GSMUA_Achr7P14150_001	Banana	nucleus	28.43	34.17
Zm00001d053382_P002	Maize	nucleus	29.97	33.09
Os02t0258300-01	Rice	nucleus	30.19	32.66
Zm00001d016081_P002	Maize	nucleus	29.53	31.57
KXG29961	Sorghum	nucleus	29.86	31.48
EER88427	Sorghum	nucleus	27.11	31.03
Os06t0524300-01	Rice	nucleus	27.44	30.83
HORVU0Hr1G021800.1	Barley	nucleus	27.11	30.31
TraesCS7B01G276600.1	Wheat	nucleus	27.44	30.19
TraesCS7A01G351500.1	Wheat	nucleus	27.22	30.13
TraesCS7A01G336000.1	Wheat	nucleus	28.21	30.13
Zm00001d046072_P001	Maize	cytosol	26.67	30.11
TraesCS7B01G247600.1	Wheat	cytosol	27.77	30.08
TraesCS7D01G343700.1	Wheat	cytosol	27.99	30.04
TraesCS7D01G371500.1	Wheat	nucleus	27.11	29.87
HORVU7Hr1G082720.10	Barley	cytosol, nucleus	27.22	29.04
GSMUA_Achr3P25070_001	Banana	vacuole	21.73	28.61
TraesCS1B01G459600.2	Wheat	plastid	20.97	24.3
Os01t0621300-01	Rice	nucleus	21.51	24.29
Os05t0586400-01	Rice	nucleus	20.31	23.72
EES03295	Sorghum	nucleus	20.75	23.68
TraesCS1D01G434200.2	Wheat	nucleus	20.31	23.66
KXG22639	Sorghum	nucleus	20.53	23.61
TraesCS3D01G229400.1	Wheat	nucleus	20.53	23.46
HORVU3Hr1G055550.3	Barley	nucleus	20.42	23.46
Zm00001d044191_P004	Maize	nucleus	20.42	23.43
TraesCS3B01G253700.2	Wheat	nucleus	20.42	23.37
TraesCS1A01G425200.2	Wheat	nucleus	19.98	23.13
Zm00001d011373_P002	Maize	nucleus	20.2	22.69
Zm00001d009716_P001	Maize	nucleus	18.99	22.64
HORVU1Hr1G092980.14	Barley	plastid	21.3	22.12
TraesCS3A01G224200.2	Wheat	nucleus	19.54	21.34

Protein Annotations

EMBL:ACUP02012179	EnsemblPlants:KRG97141	EnsemblPlantsGene:GLYMA_19G254200	EntrezGene:100795121	InterPro:Zinc_ribbon_12	ncoils:Coil
PANTHER:PTHR31105	PANTHER:PTHR31105:SF3	PFAM:PF11331	ProteinID:KRG97141	ProteinID:KRG97141.1	SEG:seg
UniParc:UPI000233ED04	UniProt:K7N0A5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:49911642..49917258

Molecular Weight (calculated)

101240.0 Da

IEP (calculated)

7.026

GRAVY (calculated)

-0.852

Length

911 amino acids

Sequence
(BLAST)

001: MSDSANKVRL VRCPKCQNLL PELADYSVYQ CGGCGAVLRA KHKGYVSGSL SDEGKVGLGG DSGKSESSLE KGLVDRSDAS DVDAKSSSGP SRDDNQRDVY
101: KVDNMDERFQ NQSADVGEKG VFDDHVDVSG NKDELGKTIG REQEEPPKSQ IGRENGSKFS GRISNWQNGE RSEMDGFWRK PRADMENVRF STSKYPDEGP
201: SNGFSSFSSN YMESWRSHKE SDGADMVQHL EQDRAELLRK LDELKVHISK SSEIVHNPKE KILPDERMLP PDHHPYGGSD PWFSDGSSGL NRTSRQFFGT
301: DNKHVAGSNH FNYHHDPYSY ASGHDMAMPN FPPSTHNPNR YGDPFASRML RRGPHQFPQQ PLHPYYPGRY ADTNPDSYEL YSHNAMLHPP TCSCFHCYDN
401: KRRGSVPAPP ASFINSRFPD IPNDPMLYHH EIPGSFGPHV HNSRTAIPPM TYHEKQLHAR WASDVNSEMG GFVRSRPRKV MLASSSQRCY PVAGGSPFIS
501: CHNCFELLLL PKKPLVLVKN HQQKVQCGAC STEISFAVIN KKLVISPNLE TKGASSRGDS SSNEVVSSHM SHSRGHVNRT GANFSSDDYS GYDFHSVDRE
601: PFSLVALNSN KSREIPSFHS SSLSTSEDEN SPETMIAPRE ATKSIHRPTT DSLSPPAGSP LQEYFDYSNN NHAVNRFGKG NQSSRSEQDK TKVDKMSSRQ
701: NSLKETALAT EMDVHDYSNN GVSQDSADAS REHYHPRSTR GGESFFANII KKSFRDFSWS NHTDDRSKIS VTVNGQPLSD RVVKKAEKLA GTIQPGNYWY
801: DFRAGFWGVM GGPCLGIIPP FIEEFNHPLP DKCSGGNTGV FVNGRELHQK DLDLLAGRGL PSDRDRSYII DISGRVLDED TGEELDSLGK LAPTVEKVKH
901: GFGMKAPRAA T

Best Arabidopsis Sequence Match ( AT3G61670.1 )
(BLAST)

001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT

Arabidopsis Description

Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.