Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G229400.1 | Wheat | nucleus | 90.77 | 94.98 |
| TraesCS3B01G253700.2 | Wheat | nucleus | 84.89 | 88.94 |
| HORVU3Hr1G055550.3 | Barley | nucleus | 76.86 | 80.83 |
| Os01t0621300-01 | Rice | nucleus | 66.43 | 68.65 |
| EES03295 | Sorghum | nucleus | 59.47 | 62.16 |
| Zm00001d011373_P002 | Maize | nucleus | 59.47 | 61.16 |
| Zm00001d044191_P004 | Maize | nucleus | 57.79 | 60.71 |
| TraesCS1A01G425200.2 | Wheat | nucleus | 41.73 | 44.22 |
| Bra037384.1-P | Field mustard | nucleus | 11.39 | 41.48 |
| CDX79176 | Canola | cytosol | 4.68 | 34.51 |
| CDY48504 | Canola | nucleus | 18.11 | 26.82 |
| CDX91876 | Canola | nucleus | 18.7 | 26.71 |
| CDY67475 | Canola | nucleus | 18.7 | 26.4 |
| CDY15177 | Canola | nucleus | 17.63 | 26.39 |
| CDX90032 | Canola | nucleus | 17.51 | 26.07 |
| Bra000943.1-P | Field mustard | nucleus | 18.7 | 26.0 |
| Bra033264.1-P | Field mustard | nucleus | 17.87 | 25.65 |
| CDY07174 | Canola | nucleus | 18.94 | 24.84 |
| CDX80013 | Canola | nucleus | 18.82 | 23.61 |
| CDY42041 | Canola | cytosol | 18.23 | 23.53 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 19.3 | 23.27 |
| Bra004541.1-P | Field mustard | nucleus | 18.59 | 23.1 |
| AT1G01440.1 | Thale cress | nucleus | 18.35 | 23.04 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 23.38 | 22.97 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 21.22 | 22.66 |
| CDX71720 | Canola | cytosol | 20.02 | 22.57 |
| CDY11374 | Canola | cytosol | 20.02 | 22.54 |
| Bra007625.1-P | Field mustard | cytosol | 19.9 | 22.4 |
| AT4G01090.1 | Thale cress | nucleus | 19.06 | 22.27 |
| CDY11373 | Canola | cytosol | 19.42 | 22.1 |
| AT3G61670.1 | Thale cress | nucleus | 20.5 | 21.65 |
| AT2G46380.1 | Thale cress | nucleus | 19.78 | 21.48 |
| TraesCS7A01G351500.1 | Wheat | nucleus | 20.5 | 20.78 |
| TraesCS7A01G336000.1 | Wheat | nucleus | 21.1 | 20.63 |
| KRH68892 | Soybean | nucleus | 21.46 | 19.8 |
| KRG97141 | Soybean | nucleus | 21.34 | 19.54 |
| KRH47938 | Soybean | nucleus | 20.62 | 19.24 |
| KRH06502 | Soybean | nucleus | 20.5 | 19.17 |
| Solyc08g082040.2.1 | Tomato | nucleus | 20.26 | 17.88 |
| Solyc01g095590.2.1 | Tomato | nucleus | 20.5 | 17.68 |
| PGSC0003DMT400032053 | Potato | nucleus | 20.02 | 17.65 |
| PGSC0003DMT400000290 | Potato | nucleus | 19.9 | 16.53 |
| KRG99688 | Soybean | cytosol | 0.96 | 11.76 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G224200.2 | EnsemblPlantsGene:TraesCS3A01G224200 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF6 | PFAM:PF11331 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:419537403..419542533
Molecular Weight (calculated)
93340.2 Da
IEP (calculated)
6.130
GRAVY (calculated)
-0.881
Length
834 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLKEIKYR RRIGLQERAQ CSDQRAVDWG VLKQDPVELL RKLDELRDQI TRSCQVAEQP REHRRAGRRP PSLLPDLPEP VPLPGYHRPR YGARYGHGLP
101: LSPCEPQHSD HGERYARQSS GRYRQYPGRQ WENGGIGHGN YHQYACASPH YLHGQRPAPQ EEHIPMARYF AGQHECYRFE RSPSISSDYD QRSVASSLYS
201: HRSVSKKRAE YFRKKAEHLC RPMHGAAPFV VCSSCYNLLQ VPMEKCMGWK QNRLQCGSCS EIISVKRVKG KTIPYTSSPP FSLSKTEQSS HDRMRRDFEH
301: QHHDDVTSAF YNLNEHSSMQ INIDFGDDNS VSSTISHERT DKECGSNRSI QSKADGISLS PGRSGDIESP KDILCERDAD CQEEHSIDGP VSPCSPILED
401: KLVDPLCSQE KHNSSEDLGM DNESDLNCKG EYIVNDDESV SMGSEQKVNE AEFVEESMCR KHDQKNKEDH CSSLEDVSKM HGQNSTKSDP DSLENGNEKH
501: GWTSKTDVTI SPESEGTRKK YDHNSKEDET SGLKVENTSN EFDKNNTADS NSAVEHANTA IEFEGTSTSE RYEENLMERD NGKLHEPCAE DANALTESGS
601: SVNGRTNSGF SRGSSEAGLD EDQSSTGKSG DSSFFAGFLK KGFKDLSLFN QSMDSVKISI NGHPISERAL KKAEKKAGPV EPGSYWYDCR AGFWGIMGRE
701: CIGIIPPYIR EFNYPMPRNC AGGDTDVIVN GRELHQRDLD LLVGRGLPRI SGKSYSIEIS GNITDDAGNK LRSLGKLAPT IHTFISQCGG VANIQQILPL
801: HSQFPPASIY EIGDMSLESE QLMNIDIFAK CKVI
101: LSPCEPQHSD HGERYARQSS GRYRQYPGRQ WENGGIGHGN YHQYACASPH YLHGQRPAPQ EEHIPMARYF AGQHECYRFE RSPSISSDYD QRSVASSLYS
201: HRSVSKKRAE YFRKKAEHLC RPMHGAAPFV VCSSCYNLLQ VPMEKCMGWK QNRLQCGSCS EIISVKRVKG KTIPYTSSPP FSLSKTEQSS HDRMRRDFEH
301: QHHDDVTSAF YNLNEHSSMQ INIDFGDDNS VSSTISHERT DKECGSNRSI QSKADGISLS PGRSGDIESP KDILCERDAD CQEEHSIDGP VSPCSPILED
401: KLVDPLCSQE KHNSSEDLGM DNESDLNCKG EYIVNDDESV SMGSEQKVNE AEFVEESMCR KHDQKNKEDH CSSLEDVSKM HGQNSTKSDP DSLENGNEKH
501: GWTSKTDVTI SPESEGTRKK YDHNSKEDET SGLKVENTSN EFDKNNTADS NSAVEHANTA IEFEGTSTSE RYEENLMERD NGKLHEPCAE DANALTESGS
601: SVNGRTNSGF SRGSSEAGLD EDQSSTGKSG DSSFFAGFLK KGFKDLSLFN QSMDSVKISI NGHPISERAL KKAEKKAGPV EPGSYWYDCR AGFWGIMGRE
701: CIGIIPPYIR EFNYPMPRNC AGGDTDVIVN GRELHQRDLD LLVGRGLPRI SGKSYSIEIS GNITDDAGNK LRSLGKLAPT IHTFISQCGG VANIQQILPL
801: HSQFPPASIY EIGDMSLESE QLMNIDIFAK CKVI
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.