Factsheet for Bra037384.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000267.1-P
Bra001393.1-P
Bra002606.1-P
Bra004709.1-P
Bra005847.1-P
Bra006738.1-P
Bra006774.1-P
Bra007528.1-P
Bra008613.1-P
Bra009045.1-P
Bra009093.1-P
Bra012095.1-P
Bra014494.1-P
Bra017091.1-P
Bra017406.1-P
Bra020343.1-P
Bra023570.1-P
Bra023895.1-P
Bra024800.1-P
Bra026274.1-P
Bra026572.1-P
Bra028196.1-P
Bra033264.1-P
Bra034169.1-P
Bra034860.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01090.1	Bra033264.1-P	AT1G01440.1	21798944
AT4G01090.1	Bra017406.1-P	AT2G02950.1	21798944
AT4G01090.1	Bra024800.1-P	AT2G02950.1	21798944
AT4G01090.1	Bra026572.1-P	AT2G02950.1	21798944
AT4G01090.1	Bra017091.1-P	AT2G39100.1	21798944
AT4G01090.1	Bra000267.1-P	AT2G42580.1	21798944
AT4G01090.1	Bra004709.1-P	AT2G42580.1	21798944
AT4G01090.1	Bra001393.1-P	AT3G11200.1	21798944
AT4G01090.1	Bra034169.1-P	AT3G11200.1	21798944
AT4G01090.1	Bra034860.1-P	AT3G11200.1	21798944
AT4G01090.1	Bra023895.1-P	AT3G21215.1	21798944
AT4G01090.1	Bra007528.1-P	AT3G60360.1	21798944
AT4G01090.1	Bra014494.1-P	AT3G60360.1	21798944
AT4G01090.1	Bra026274.1-P	AT4G28230.1	21798944
AT4G01090.1	Bra005847.1-P	AT5G05190.1	21798944
AT4G01090.1	Bra009093.1-P	AT5G05190.1	21798944
AT4G01090.1	Bra009045.1-P	AT5G10270.1	21798944
AT4G01090.1	Bra008613.1-P	AT5G16560.1	21798944
AT4G01090.1	Bra023570.1-P	AT5G16560.1	21798944
AT4G01090.1	Bra028196.1-P	AT5G38640.1	21798944
AT4G01090.1	Bra006774.1-P	AT5G58300.1	21798944
AT4G01090.1	Bra002606.1-P	AT5G58950.1	21798944
AT4G01090.1	Bra006738.1-P	AT5G58950.1	21798944
AT4G01090.1	Bra020343.1-P	AT5G58950.1	21798944
AT4G01090.1	Bra012095.1-P	AT5G66720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48504	Canola	nucleus	91.27	37.12
CDY07174	Canola	nucleus	93.01	33.49
Bra000943.1-P	Field mustard	nucleus	70.31	26.83
Bra033264.1-P	Field mustard	nucleus	63.32	24.96
AT4G01090.1	Thale cress	nucleus	74.67	23.95
Bra004541.1-P	Field mustard	nucleus	49.34	16.84
GSMUA_Achr10P...	Banana	nucleus	51.09	15.58
Bra007625.1-P	Field mustard	cytosol	49.34	15.25
GSMUA_Achr10P...	Banana	nucleus	49.34	14.41
GSMUA_Achr7P14150_001	Banana	nucleus	47.6	14.38
GSMUA_Achr3P25070_001	Banana	vacuole	42.36	14.02
GSMUA_Achr10P...	Banana	cytosol	47.16	13.92
Os06t0524300-01	Rice	nucleus	46.29	13.07
TraesCS7A01G351500.1	Wheat	nucleus	46.72	13.0
EER88427	Sorghum	nucleus	44.98	12.94
TraesCS7D01G371500.1	Wheat	nucleus	46.72	12.94
TraesCS7B01G276600.1	Wheat	nucleus	46.29	12.8
Zm00001d046072_P001	Maize	cytosol	44.98	12.76
Zm00001d053382_P002	Maize	nucleus	45.85	12.73
TraesCS3B01G253700.2	Wheat	nucleus	44.1	12.69
TraesCS3D01G229400.1	Wheat	nucleus	44.1	12.67
Os01t0621300-01	Rice	nucleus	44.54	12.64
HORVU3Hr1G055550.3	Barley	nucleus	43.23	12.48
Os05t0586400-01	Rice	nucleus	42.36	12.44
Os02t0258300-01	Rice	nucleus	44.98	12.23
KXG29961	Sorghum	nucleus	45.85	12.15
TraesCS1D01G434200.2	Wheat	nucleus	41.48	12.15
Zm00001d044191_P004	Maize	nucleus	41.92	12.09
TraesCS1B01G459600.2	Wheat	plastid	41.48	12.09
KXG22639	Sorghum	nucleus	41.48	11.99
Zm00001d016081_P002	Maize	nucleus	44.54	11.97
TraesCS1A01G425200.2	Wheat	nucleus	41.05	11.94
EES03295	Sorghum	nucleus	41.48	11.9
HORVU0Hr1G021800.1	Barley	nucleus	42.36	11.9
Zm00001d011373_P002	Maize	nucleus	41.92	11.84
TraesCS7D01G343700.1	Wheat	cytosol	42.79	11.54
TraesCS7B01G247600.1	Wheat	cytosol	41.92	11.41
TraesCS3A01G224200.2	Wheat	nucleus	41.48	11.39
TraesCS7A01G336000.1	Wheat	nucleus	42.36	11.37
Zm00001d009716_P001	Maize	nucleus	36.68	10.99
HORVU1Hr1G092980.14	Barley	plastid	41.48	10.83
HORVU7Hr1G082720.10	Barley	cytosol, nucleus	37.99	10.19

Protein Annotations

EnsemblPlants:Bra037384.1	EnsemblPlants:Bra037384.1-P	EnsemblPlantsGene:Bra037384	PANTHER:PTHR31105	PANTHER:PTHR31105:SF3	SEG:seg
UniParc:UPI00025420F6	UniProt:M4F8H2	MapMan:35.2	:	:	:

Description

AT1G01440 (E=4e-086) | extra-large G-protein-related

Coordinates

chrA09:-:772398..773426

Molecular Weight (calculated)

25418.6 Da

IEP (calculated)

5.979

GRAVY (calculated)

-0.825

Length

229 amino acids

Sequence
(BLAST)

001: MAELGYHKPD KQEFFTKQDS VKPESLATET EVSYNGYSNT EISEDSNGRE DSNNNNNRPR SRKGSESGST EVTTRSSTDD QGKLLEVWVN GHLIPEERVS
101: SAEKLAGPVQ AGKYWYDYRA GFWGVMGKPC LGIIPPFIEE FSHHPMPDNC GAGNTEVYVN GRELHKRDLE LLAGRGLPRD KNRSYILDIS GRILDGESGE
201: ELKSLGKLAP TVDKVKHGFG MRVPRSLAS

Best Arabidopsis Sequence Match ( AT4G01090.1 )
(BLAST)

001: MRSRGDVSEA EGTRSDAGSS RSEEETSLKE KHSNSRAGSQ RSGKSLRNDE PNYGSDSSSK NTSSSNNPIE YTEHERAELL RRLDSIKDHL LRGGGGGNNV
101: VDKPKEPDQN QPFLRPVHLH GHANHNPGPS YYHQYPEPIQ YPGPVHGMYP QAYQDPYGYQ RRPPPVPNPN WYPPGHYPNQ MARQYPGGQY VELGPDIVEP
201: HSYYPATPGR YGDLPPYSPV SSHHREEKLA TQYSDMPPYS PVSSHHRGEK LTTPYSPRVN NGSSFPSSMG TPGPRGGYAR WPSEHDSEMG GAFARGYVKK
301: AVSDTGVRRC HPLAGGAPFI ACHSCFELLY LPKKKLLSQE RLHKLQCGAC SEVISFTIVD RKLVFSSGNE ETKPVSLEVE DRNTTNTVVI EEEVSSVDFN
401: SSGRDIPRKD EEEPVQELRN HQDTITTQSV RSESQHSDDE ERSSNSSEQQ QKEVKSVRRR GKGSKAPEPA APDNASLLEL FEYSNVNRAA LAYGMAQLGY
501: EKPDKQKSFM TQDSLKPESV ATETEVSYNG YSNTEISEDS RYSNRKGSEY GSTEITTRSS TDQNEDQMKS LEVWVNGHLI PEDLVSSAEK LAGPIQAGKY
601: WYDYRAGFWG VMGKPCLGII PPFIEEFSHP MLDNCAAGNT DVFVNGRELH KRDFELLVGR GLPRDKNRSY IVDISGRILD QDSGEELHSL GKLAPTIEKV
701: KHGFGMRVPR SLAS

Arabidopsis Description

AT4G01090 protein [Source:UniProtKB/TrEMBL;Acc:Q9M155]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.