Factsheet for Bra012095.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003546.1-P
Bra008498.1-P
Bra012532.1-P
Bra013423.1-P
Bra017974.1-P
Bra018081.1-P
Bra018126.1-P
Bra025315.1-P
Bra033769.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66720.1	Bra003546.1-P	AT1G80040.1	21798944
AT5G66720.1	Bra008498.1-P	AT1G80040.1	21798944
AT5G66720.1	Bra025315.1-P	AT3G27960.1	21798944
AT5G66720.1	Bra018126.1-P	AT3G47620.1	21798944
AT5G66720.1	Bra018081.1-P	AT3G48150.1	21798944
AT5G66720.1	Bra033769.1-P	AT3G48150.1	21798944
AT5G66720.1	Bra017974.1-P	AT3G49580.1	21798944
AT5G66720.1	Bra012532.1-P	AT4G19700.1	21798944
AT5G66720.1	Bra013423.1-P	AT4G19700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53852	Canola	plastid	98.78	98.78
CDY30759	Canola	plastid	97.31	97.07
AT5G66720.1	Thale cress	plastid	79.22	78.26
VIT_04s0023g01400.t01	Wine grape	plastid	54.03	58.31
KRH69944	Soybean	cytosol, plastid	48.66	54.67
KRH08301	Soybean	cytosol	49.88	53.97
KRH28642	Soybean	mitochondrion	49.14	47.52
Bra038489.1-P	Field mustard	mitochondrion	52.81	46.25
KRH76843	Soybean	plastid	47.92	44.44
EER90674	Sorghum	mitochondrion, plastid	44.99	39.48
Zm00001d034575_P001	Maize	plastid	44.74	39.27
Zm00001d013027_P002	Maize	mitochondrion	44.5	38.89
Os03t0809300-01	Rice	plastid	44.99	38.41
Bra018331.1-P	Field mustard	plastid	21.52	29.14
Bra011448.1-P	Field mustard	plastid	24.45	12.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EnsemblPlantsGene:Bra012095	EnsemblPlants:Bra012095.1
EnsemblPlants:Bra012095.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	InterPro:IPR001932	InterPro:IPR036457
UniProt:M4D6I6	PFAM:PF07228	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR12320
PANTHER:PTHR12320:SF16	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00025417D0	:

Description

AT5G66720 (E=2e-174) | 5-azacytidine resistance protein -related

Coordinates

chrA07:+:10051296..10052746

Molecular Weight (calculated)

43277.0 Da

IEP (calculated)

6.775

GRAVY (calculated)

-0.132

Length

409 amino acids

Sequence
(BLAST)

001: MSATALSRLN PISQIGFQVA AKSNKTFFSG AQRRLFSDSG RRLRGGAMAT SGSLPVFGDA CLDDLFTACA NNGLDFTKKP SSPAGVTFFT AASMRLGRKR
101: EHLKNRLVCH YSSIDPLDKT PSLFGGFSKT VHTTSTVCFS AHELSTSQDS ELSPTTTSLK CLKLVSGSCY LPHPEKEATG GEDAHFICDE EQAIGVADGV
201: GGWAEVGVNA GLFSRELMSY SVAAIRELAK GSSIDPLMVL EKAHSQTRAQ GSSTACIIAL TDKGLHAINL GDSGFTVVRD GTTVFQSPVQ QHGFNFTYQL
301: GCGDSGGDMP RSGQVFMIDV EAGDVIVAGT DGVYDNLYNE DITGVVVSSV RAGLDPKGTA QKIADLARAR AVDKKRQSPF ATAAQEAGYR YYGGKLDDIT
401: ALVSYVTPA

Best Arabidopsis Sequence Match ( AT5G66720.1 )
(BLAST)

001: MSATALSRLN PVSQFGFQRI VAGKSKSFFS NSGQRRLFSD SSRFRQAMAA SGSLPVFGDA CLDDLVTTCS NGLDFTKKRS SGGSFTINCP VASMRLGKRG
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKSLRL VSGSCYLPHP EKEATGGEDA HFICDEEQAI
201: GVADGVGGWA EVGVNAGLFS RELMSYSVSA IQEQHKGSSI DPLVVLEKAH SQTKAKGSST ACIIVLKDKG LHAINLGDSG FTVVREGTTV FQSPVQQHGF
301: NFTYQLESGN SADVPSSGQV FTIDVQSGDV IVAGTDGVYD NLYNEEITGV VVSSVRAGLD PKGTAQKIAE LARQRAVDKK RQSPFATAAQ EAGYRYYGGK
401: LDDITAVVSY VTSS

Arabidopsis Description

Probable protein phosphatase 2C 80 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.