Factsheet for Bra038489.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 1
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60192	Canola	mitochondrion	99.79	99.79
CDY40532	Canola	mitochondrion	96.57	96.16
AT4G16580.1	Thale cress	mitochondrion	85.22	85.22
GSMUA_Achr8P31180_001	Banana	cytosol	23.98	69.14
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	47.97	59.1
PGSC0003DMT400013180	Potato	mitochondrion	49.25	58.52
KRH15248	Soybean	mitochondrion	62.53	57.71
KRH05793	Soybean	mitochondrion	62.31	57.51
TraesCS6A01G111100.1	Wheat	mitochondrion	46.47	56.51
TraesCS6D01G099700.1	Wheat	mitochondrion	46.04	55.7
Solyc12g089090.1.1	Tomato	mitochondrion	60.81	54.72
VIT_18s0001g12160.t01	Wine grape	extracellular	60.39	54.34
PGSC0003DMT400039957	Potato	mitochondrion	60.17	54.14
Bra012095.1-P	Field mustard	plastid	46.25	52.81
GSMUA_Achr9P09210_001	Banana	mitochondrion, plastid	52.89	52.55
TraesCS6B01G139200.1	Wheat	mitochondrion	45.82	52.45
GSMUA_Achr6P35080_001	Banana	plastid	52.68	52.12
HORVU6Hr1G019900.1	Barley	plastid	46.9	50.93
GSMUA_AchrUn_...	Banana	plastid	49.46	48.94
EER90674	Sorghum	mitochondrion, plastid	45.82	45.92
Zm00001d013027_P002	Maize	mitochondrion	45.82	45.73
Os03t0809300-01	Rice	plastid	46.47	45.3
Zm00001d034575_P001	Maize	plastid	45.18	45.28
Bra018331.1-P	Field mustard	plastid	20.34	31.46
GSMUA_Achr8P31190_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	21.84	29.82
Bra011448.1-P	Field mustard	plastid	25.27	14.86

Protein Annotations

EnsemblPlants:Bra038489.1	EnsemblPlants:Bra038489.1-P	EnsemblPlantsGene:Bra038489	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PANTHER:PTHR12320	PANTHER:PTHR12320:SF16	PFAM:PF07228	PFscan:PS51746	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI00025444FC	UniProt:M4FBM3	MapMan:35.1	:	:

Description

AT4G16580 (E=3e-219) | catalytic

Coordinates

chrA01:+:10913814..10915217

Molecular Weight (calculated)

49488.2 Da

IEP (calculated)

6.849

GRAVY (calculated)

-0.172

Length

467 amino acids

Sequence
(BLAST)

001: MLPVREGLQK QVKILIGLGF GGYRGFHSRF ASPNGFLEPA SSDLLLSNER RNLSVLGALS RTFSVPSVSG PAFQVCGYHI DLLLSDASLR SVGESMASLG
101: GSKSLFLDPL VSGVTVCGDG HSRGRVSMRL RGRDHGDNNN STVYGYFAYR AAKKWIAFNP KTGGLGFRGL HSSLLSRFSA GNAPDVSFDS SPAEEQVKGS
201: SSDSVADKLC VKPLKLVSGS CYLPHPDKEA TGGEDAHFIC AEEQALGVAD GVGGWAELGI DAGYYSRELM SNSVNAIQDE PKGSIDPARV LEKAHTSTKS
301: QGSSTACIIA LTDQGLNAIN LGDSGFMVVR EGHTVFRSPV QQHDFNFTYQ LESGSNGDLP SSGQVFTVAV APGDVIIAGT DGLFDNLYNN EITAIVVQAV
401: RAGTDPQVTA QKIAALARQR AQDKNRQTPF STAAQDAGFR YYGGKLDDIT VVVSYVAASK EVGKTLK

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.