Factsheet for HORVU6Hr1G019900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G099700.1	Wheat	mitochondrion	85.35	95.08
TraesCS6A01G111100.1	Wheat	mitochondrion	84.88	95.05
TraesCS6B01G139200.1	Wheat	mitochondrion	83.49	87.99
GSMUA_Achr8P31180_001	Banana	cytosol	28.37	75.31
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	47.21	53.56
PGSC0003DMT400013180	Potato	mitochondrion	48.37	52.93
GSMUA_AchrUn_...	Banana	plastid	54.19	49.36
Bra038489.1-P	Field mustard	mitochondrion	50.93	46.9
CDY60192	Canola	mitochondrion	50.7	46.68
CDY40532	Canola	mitochondrion	50.23	46.06
AT4G16580.1	Thale cress	mitochondrion	48.84	44.97
Zm00001d013027_P002	Maize	mitochondrion	46.05	42.31
KRH05793	Soybean	mitochondrion	49.77	42.29
KRH15248	Soybean	mitochondrion	49.77	42.29
VIT_18s0001g12160.t01	Wine grape	extracellular	50.93	42.2
EER90674	Sorghum	mitochondrion, plastid	45.12	41.63
Solyc12g089090.1.1	Tomato	mitochondrion	50.23	41.62
PGSC0003DMT400039957	Potato	mitochondrion	49.77	41.23
Zm00001d034575_P001	Maize	plastid	44.19	40.77
Os03t0809300-01	Rice	plastid	43.49	39.04
HORVU1Hr1G064790.1	Barley	cytosol, peroxisome	14.65	33.51
HORVU7Hr1G087120.1	Barley	plastid	21.4	28.84
HORVU7Hr1G087090.1	Barley	plastid	21.4	28.84
HORVU7Hr1G087070.1	Barley	plastid	21.4	28.84
HORVU6Hr1G059490.1	Barley	cytosol, nucleus, peroxisome	20.93	28.39
HORVU5Hr1G117220.2	Barley	mitochondrion	14.42	28.31
HORVU3Hr1G018110.1	Barley	plastid	22.33	27.2
HORVU2Hr1G018620.1	Barley	cytosol	9.3	26.85
HORVU1Hr1G082540.4	Barley	peroxisome, plastid	25.81	22.2

Protein Annotations

EMBL:AK367743	EnsemblPlants:HORVU6Hr1G019900.1	EnsemblPlantsGene:HORVU6Hr1G019900	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PANTHER:PTHR12320	PANTHER:PTHR12320:SF16	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000B480D61	UniProt:A0A287TI85	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr6H:+:54801305..54804398

Molecular Weight (calculated)

44512.4 Da

IEP (calculated)

6.860

GRAVY (calculated)

-0.084

Length

430 amino acids

Sequence
(BLAST)

001: KTVASLCPGT ASHPCPSPTP PHPRVSTTFA GASLRQLLGR RRGRMSPAIA LRRAAAWLLR GGAGAGAPRA ASSATLPGLG GAPLSPARGL QGREAAGFLG
101: IWGGPAAGGV SGGVSWWFRC AASSVPRPGL LVEQLLVGGG RSFATGAAPV EVSFSPAARE ADVSQPEKSV GASDKTMLGD RSLKLVSGVC YLPHPDKEET
201: GGEDAHFIWD EQAIGIADGV GGWASYGIDA GQYARDIMSN AVTAIEEEPK DSIDLTRVLE KAHSSTTVPG SSTACIIALT DQGLQAINLG DSGFIVIRDG
301: CTLCRSPVQQ HDFNFSYQLE SGNSNDLPNA AQVFKVPVAS GDVIVAGTDG LFDNLYNNDI TAVVVHATRA GLEPQVAAQK IAALARQRAQ DKNRQSPFST
401: AAQDAGFRYY GGKLDDITVV VSYVTAFGNS

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.