Factsheet for GSMUA_AchrUn_randomP07130_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P31180_001	Banana	cytosol	30.51	88.89
TraesCS6A01G111100.1	Wheat	mitochondrion	49.58	60.94
GSMUA_Achr9P09210_001	Banana	mitochondrion, plastid	60.17	60.43
TraesCS6D01G099700.1	Wheat	mitochondrion	49.36	60.36
TraesCS6B01G139200.1	Wheat	mitochondrion	48.09	55.64
PGSC0003DMT400013180	Potato	mitochondrion	45.76	54.96
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	44.07	54.88
GSMUA_Achr6P35080_001	Banana	plastid	54.24	54.24
HORVU6Hr1G019900.1	Barley	plastid	49.36	54.19
VIT_18s0001g12160.t01	Wine grape	extracellular	55.3	50.29
KRH15248	Soybean	mitochondrion	53.81	50.2
Bra038489.1-P	Field mustard	mitochondrion	48.94	49.46
CDY60192	Canola	mitochondrion	48.94	49.46
KRH05793	Soybean	mitochondrion	52.97	49.41
PGSC0003DMT400039957	Potato	mitochondrion	53.81	48.94
CDY40532	Canola	mitochondrion	48.52	48.83
Solyc12g089090.1.1	Tomato	mitochondrion	53.6	48.75
EER90674	Sorghum	mitochondrion, plastid	47.67	48.28
AT4G16580.1	Thale cress	mitochondrion	47.25	47.75
Zm00001d013027_P002	Maize	mitochondrion	47.25	47.65
Zm00001d034575_P001	Maize	plastid	45.76	46.35
Os03t0809300-01	Rice	plastid	46.19	45.51
GSMUA_Achr8P31190_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	26.48	36.55
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	16.74	31.73
GSMUA_Achr5P10960_001	Banana	cytosol	29.03	26.76
GSMUA_Achr2P22130_001	Banana	plastid	22.03	13.58
GSMUA_Achr6P10470_001	Banana	nucleus	21.61	11.35

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP07130_001	EnsemblPlants:GSMUA_AchrUn_randomT07130_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG07130_001	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PANTHER:PTHR12320	PANTHER:PTHR12320:SF16	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002954ECF	UniProt:M0U724	MapMan:35.1	:

Description

Probable protein phosphatase 2C 55 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07130_001]

Coordinates

chrchrUn_random:-:31759947..31773066

Molecular Weight (calculated)

51398.8 Da

IEP (calculated)

6.146

GRAVY (calculated)

-0.228

Length

472 amino acids

Sequence
(BLAST)

001: MPAHFPSKLF RFSVELLYRQ RHSGLFQSHS FSSLVDCIRA FSSNDRPTAE SIVGTFYRMV SVPSLTGASW YSCIHNVGRL VSESTRSSSC VLFERNMAFS
101: CNSLPGGAEW VTHHQNWKML GSFLSFDAYF SHGNFDYCSR SCKTLRIQEL SNSTAVYRHI WSSAIGESFN LFSPNGIKVL SSSFFTSFST GAASDMSLGG
201: SPQEEQLDNS SSSSDSDQKK PSNRALKLLS GSCYLPHPDK EETGGEDAHF IWDEQAIGVA DGVGGWADHG VDAGQYSRAL MSHASDAIEE ESKGSIDPLR
301: VLEKAYLRTK AQGSSTACII ALTDQGIRAV NLGDSGFIVV RDGCTIFRSP VQQHDFNFTY QLESGNASDL PSAAQVFTFP VESGDVIVAG TDGLFDNLYN
401: SDITAVVVHG IRAGLGPQVM AQKIAALARQ RAQDKNRQTP FSTSAQEAGY RYYGGKLDDI TVVVSYITAF GN

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.