Factsheet for GSMUA_Achr6P10470_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91878	Sorghum	cytosol	13.01	57.92
HORVU1Hr1G064790.1	Barley	cytosol, peroxisome	11.79	56.38
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	20.47	51.4
HORVU5Hr1G117220.2	Barley	mitochondrion	12.46	51.14
HORVU2Hr1G018620.1	Barley	cytosol	8.12	48.99
GSMUA_Achr2P22130_001	Banana	plastid	40.38	47.39
Os10t0370000-02	Rice	peroxisome	21.91	42.37
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	22.47	40.89
TraesCS1A01G371600.1	Wheat	peroxisome, plastid	22.69	40.56
TraesCS1B01G391400.1	Wheat	peroxisome, plastid	22.36	39.96
HORVU1Hr1G082540.4	Barley	peroxisome, plastid	21.91	39.4
CDY72337	Canola	cytosol, peroxisome	15.13	38.53
Os03t0192500-01	Rice	cytosol	24.36	38.49
Zm00001d014291_P001	Maize	plastid	23.92	38.05
TraesCS4A01G038300.1	Wheat	cytosol	23.25	37.79
TraesCS4D01G267000.1	Wheat	cytosol	23.03	37.43
TraesCS4B01G267400.1	Wheat	cytosol	22.58	36.51
KXG39979	Sorghum	cytosol	23.36	35.29
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	9.45	34.14
GSMUA_Achr8P31180_001	Banana	cytosol	5.78	32.1
VIT_12s0055g01130.t01	Wine grape	plastid	27.03	31.48
KRH10513	Soybean	mitochondrion, plastid	24.92	28.79
CDX68984	Canola	plastid	19.91	25.61
GSMUA_Achr9P09210_001	Banana	mitochondrion, plastid	12.79	24.47
AT4G33500.1	Thale cress	plastid	19.58	24.31
GSMUA_Achr6P35080_001	Banana	plastid	12.57	23.94
Bra011448.1-P	Field mustard	plastid	20.91	23.68
PGSC0003DMT400032725	Potato	nucleus	23.47	22.07
GSMUA_AchrUn_...	Banana	plastid	11.35	21.61
GSMUA_Achr5P10960_001	Banana	cytosol	11.79	20.7
Solyc01g105020.2.1	Tomato	nucleus, plastid	23.92	20.46
CDX75361	Canola	plastid	18.35	19.57
GSMUA_Achr8P31190_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	6.45	16.96

Protein Annotations

EnsemblPlants:GSMUA_Achr6P10470_001	EnsemblPlants:GSMUA_Achr6T10470_001	EnsemblPlantsGene:GSMUA_Achr6G10470_001	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001932	InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16
PANTHER:PTHR12320	PANTHER:PTHR12320:SF9	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000294F820	UniProt:M0T5U6	MapMan:35.1	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G10470_001]

Coordinates

chr6:+:6998243..7003802

Molecular Weight (calculated)

97257.6 Da

IEP (calculated)

3.913

GRAVY (calculated)

-0.437

Length

899 amino acids

Sequence
(BLAST)

001: MVISTECSDG STIFRFGDAT EVKRDEVAAS GNCVLEKDVE NSGKADAKDP TENDSGEMSQ ETPKRSDLEM KGLEPVVIAG ICLEETAVAS EEKITVNEVE
101: KPEATRESCG NGELKGLATQ LSQESCVSAI DDVGSLIEDE EEDVNSVDVC NKVDEAKCCV EWTNILIGHA SGNDDKVVRD IDSDIHVSPE DQVVQSLDED
201: SDSALRASVR SVCPAKCMDM DVNSVSETSQ LSSSSCMDES EGESSNGTQV EKAPEYSEGR TSDMDIDFGD NSLDEMTFEA TKEHKESRSP DVDDEVKDVH
301: GDGMLQRSGS FENLEIPVHE TIQIMEPVEM VPKIGAGICL EETAVASEEN ITVTEVEKPE ATRESCGKGE LKGLAAQLSQ ESCVSAIDDV GSLIEDEEED
401: VNSVDVCNKV DEAKCCVEWT NILIGHASGN DDKVVRDIDS DIHVSPEDQV VQSLDEDSDS ALRASVRSVC PAKCMDMEVN SVGETSQLSS SSCMDESEGE
501: SSNGTQVEKA PEYSEGRTSD MDIDFGDNSL DEMTFETTKE HKESRSPDVD DEVKDVHGDG MLQRSGSFEN LEIPVHETIQ IMEAQFEDIG ASQVSMAAQD
601: ITDVDVELFS SYADGHGDSN TVERLVKAET IDGMRQDENA EVAGYNRVDQ VPAHLLSLSS GAAILPHPSK ALTGGEDAYF VALNNWFGVA DGVGQWSLEG
701: INAGLYAREL MENCERFVSK YEGTKPDEIL TKAAAEASSP GSSTILVGYF DGQVLYVANI GDSGFIVIRN DTVFKRSTPM VYGFNFPFQI QRGDDPSRYI
801: EMYKIDLHEE DVVVTATDGL FDNLYEHEVA DIVSKSLQAS LKPREIAEIL ATMAQELGRS ASARSPFADA ALAAGYPGFT GGKLDDVTVI VSIVERSSR

Best Arabidopsis Sequence Match ( AT4G33500.1 )
(BLAST)

001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST

Arabidopsis Description

Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.