Factsheet for Zm00001d048203_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G064790.1	Barley	cytosol, peroxisome	39.94	76.06
HORVU2Hr1G018620.1	Barley	cytosol	28.77	69.13
HORVU5Hr1G117220.2	Barley	mitochondrion	41.34	67.58
KXG39979	Sorghum	cytosol	92.18	55.46
Os03t0192500-01	Rice	cytosol	78.77	49.56
TraesCS4D01G267000.1	Wheat	cytosol	75.14	48.64
TraesCS4A01G038300.1	Wheat	cytosol	75.14	48.64
TraesCS4B01G267400.1	Wheat	cytosol	74.86	48.2
Zm00001d014291_P001	Maize	plastid	66.2	41.95
CDY72337	Canola	cytosol, peroxisome	37.43	37.96
Zm00001d039745_P001	Maize	plastid	25.7	27.96
Zm00001d047249_P001	Maize	cytosol	22.63	25.63
GSMUA_Achr2P22130_001	Banana	plastid	53.35	24.93
Zm00001d051202_P001	Maize	peroxisome	21.79	23.49
Zm00001d051200_P001	Maize	cytosol	21.51	23.19
VIT_12s0055g01130.t01	Wine grape	plastid	48.88	22.67
Zm00001d013027_P002	Maize	mitochondrion	29.33	22.44
Zm00001d034575_P001	Maize	plastid	29.05	22.32
Zm00001d017325_P001	Maize	cytoskeleton, cytosol, peroxisome	21.79	20.63
GSMUA_Achr6P10470_001	Banana	nucleus	51.4	20.47
Zm00001d051199_P001	Maize	cytosol	17.88	20.13
KRH10513	Soybean	mitochondrion, plastid	42.46	19.54
CDX68984	Canola	plastid	36.87	18.88
AT4G33500.1	Thale cress	plastid	36.87	18.23
Bra011448.1-P	Field mustard	plastid	39.11	17.63
PGSC0003DMT400032725	Potato	nucleus	44.13	16.53
Solyc01g105020.2.1	Tomato	nucleus, plastid	42.74	14.56
CDX75361	Canola	plastid	32.4	13.76

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A1D6PIH1	ProteinID:AQL09117.1
GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF07228	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR12320	PANTHER:PTHR12320:SF9	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0008456BCF	EnsemblPlantsGene:Zm00001d048203	EnsemblPlants:Zm00001d048203_P002	EnsemblPlants:Zm00001d048203_T002	SEG:seg

Description

Probable protein phosphatase 2C BIPP2C1

Coordinates

chr9:-:152377111..152382141

Molecular Weight (calculated)

37912.2 Da

IEP (calculated)

4.224

GRAVY (calculated)

-0.254

Length

358 amino acids

Sequence
(BLAST)

001: MGGILCDERV ERMETNSVER EASNGSTVSS EEGVDRMGTS LDDSEASDGS TTQDSDTDVE TESSVSSIEE QEAGYGAHIP QPDPAVCKVA KENNTAGVKI
101: SDRMTSVSEL TLVLASGASM LPHPSKVRTG GEDAYFIACD GWFGVADGVG QWSFEGINAG LYARELMDGC KKIVEETQGA PGMRTEEVLA KAADEARSPG
201: SSTVLVAHFD GKVLHASNIG DSGFLVIRNG EVHKKSNPMT YGFNFPLQIE KGDDPLKLVQ KYAICLQEGD VVVTASDGLF DNVYEEEVAG IVSKSLEADL
301: KPTEIADLLV ARAKEVGRCG FGRSPFSDSA LAAGYLGYSG GKLDDVTVVV SIVRKSEV

Best Arabidopsis Sequence Match ( AT4G33500.1 )
(BLAST)

001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST

Arabidopsis Description

Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.