CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91878	Sorghum	cytosol	12.85	49.51
HORVU1Hr1G064790.1	Barley	cytosol, peroxisome	11.31	46.81
HORVU5Hr1G117220.2	Barley	mitochondrion	11.95	42.47
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	19.54	42.46
CDY72337	Canola	cytosol, peroxisome	17.99	39.66
HORVU2Hr1G018620.1	Barley	cytosol	7.58	39.6
Os10t0370000-02	Rice	peroxisome	23.01	38.49
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	23.39	36.84
TraesCS1A01G371600.1	Wheat	peroxisome, plastid	23.78	36.78
TraesCS1B01G391400.1	Wheat	peroxisome, plastid	23.39	36.18
HORVU1Hr1G082540.4	Barley	peroxisome, plastid	23.14	36.0
Os03t0192500-01	Rice	cytosol	25.32	34.62
Zm00001d014291_P001	Maize	plastid	24.94	34.34
VIT_12s0055g01130.t01	Wine grape	plastid	31.88	32.12
TraesCS4D01G267000.1	Wheat	cytosol	22.49	31.65
TraesCS4B01G267400.1	Wheat	cytosol	22.49	31.47
TraesCS4A01G038300.1	Wheat	cytosol	22.11	31.1
KXG39979	Sorghum	cytosol	23.01	30.08
KRH30165	Soybean	cytosol	8.48	29.73
GSMUA_Achr2P22130_001	Banana	plastid	27.64	28.07
KRG98206	Soybean	cytosol	11.44	27.55
KRH69944	Soybean	cytosol, plastid	12.85	27.47
CDX68984	Canola	plastid	24.55	27.32
AT4G33500.1	Thale cress	plastid	25.19	27.07
KRH08301	Soybean	cytosol	13.11	26.98
Bra011448.1-P	Field mustard	plastid	25.58	25.06
GSMUA_Achr6P10470_001	Banana	nucleus	28.79	24.92
KRH28642	Soybean	mitochondrion	13.5	24.82
KRH05793	Soybean	mitochondrion	15.55	23.91
PGSC0003DMT400032725	Potato	nucleus	28.92	23.54
KRH15248	Soybean	mitochondrion	15.3	23.52
KRH76843	Soybean	plastid	12.85	22.68
CDX75361	Canola	plastid	23.52	21.71
Solyc01g105020.2.1	Tomato	nucleus, plastid	28.41	21.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100815469	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A0R0FWY4
EMBL:ACUP02009147	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G052300	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KRH10513	ProteinID:KRH10513	ProteinID:KRH10513.1	PFAM:PF07228	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR12320	PANTHER:PTHR12320:SF9	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0006EDF06D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:4125248..4131288

Molecular Weight (calculated)

83682.9 Da

IEP (calculated)

3.971

GRAVY (calculated)

-0.369

Length

778 amino acids

Sequence
(BLAST)

001: MALLFSRSFH CLWLPCCNVP PKSSERLRIY APIPLPKPWV SFTHHTRLLP NATSSPNSDP EDFDILSSTE HSDGSFVFRF ASANEIREQL DELNKKKKSD
101: ALNKKKKKLA REGVLEEGKA GVRALVSESV KKLNTEVDRT LGGEIESSST VVVDVADQNP QLLLNEKEGD VLDSDSGPPV TNDLQKIDRH LKLDSVEDGD
201: GQRGISSEDV GTESNGVPSA SEADSELDSH REAVVSTVAT EADVVSDLKS DAFAEVEEEE EAGKSYGVDR TTNNLAAAVD AELSELVPES TFLDSEQVGD
301: SASNNQTDAV NAESSELVPE STCLESEQVS YSATNNQTDA VDAELSELVP ESTSLESEQA GYSETNNLTD GVDANLSDLM PVSTSLESEQ VGYGATNNLI
401: AAVDANISEL LPESTSAESE QVGYSETNNM TSGVDADLSE LTPVSSSLES ELVANDEETA HLIVDDFINA SKMGKSELSL DEVPSSNLEN NIDVDNTERS
501: DYESTSQLTV PQILSAEVAS HGEKTSKTEL FLISGAACLP HPSKALTGRE DAYFISHQNW LAVADGVGQW SLEENCTGSN AGLYIRELIE KCENIVSNYE
601: NNSTIEPAEV ITRGAAETQS PGSCSILVTN FDGQVLHAAN VGNTGFIIIR DGSIFKKSTP MFHEFNFPLQ IVKGDDPSEL IEGYTMDLHD GDVIVTATNG
701: LFDNLYEQEI ASIISKSLEA SLTPQEIAEF LATRAQEVGR STSMRSPFAD AAQAVGYVGF IGGKLDDVTV IVSLVQPR

Best Arabidopsis Sequence Match ( AT4G33500.1 )
(BLAST)

001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST

Arabidopsis Description

Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.