Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G378200.1 | Wheat | peroxisome, plastid | 91.65 | 93.32 |
| TraesCS1B01G391400.1 | Wheat | peroxisome, plastid | 90.46 | 90.46 |
| HORVU1Hr1G082540.4 | Barley | peroxisome, plastid | 88.07 | 88.6 |
| OQU91878 | Sorghum | cytosol | 26.84 | 66.83 |
| Os10t0370000-02 | Rice | peroxisome | 58.85 | 63.66 |
| Zm00001d014291_P001 | Maize | plastid | 58.05 | 51.68 |
| TraesCS4A01G038300.1 | Wheat | cytosol | 47.91 | 43.58 |
| CDY72337 | Canola | cytosol, peroxisome | 25.84 | 36.83 |
| GSMUA_Achr2P22130_001 | Banana | plastid | 47.12 | 30.94 |
| TraesCS3A01G100000.1 | Wheat | plastid | 18.49 | 28.88 |
| TraesCS6A01G111100.1 | Wheat | mitochondrion | 21.87 | 28.65 |
| VIT_12s0055g01130.t01 | Wine grape | plastid | 42.35 | 27.59 |
| TraesCS7A01G362800.1 | Wheat | plastid | 16.5 | 25.94 |
| KRH10513 | Soybean | mitochondrion, plastid | 36.78 | 23.78 |
| AT4G33500.1 | Thale cress | plastid | 32.8 | 22.79 |
| TraesCS5A01G460700.1 | Wheat | plastid | 20.87 | 22.78 |
| GSMUA_Achr6P10470_001 | Banana | nucleus | 40.56 | 22.69 |
| CDX68984 | Canola | plastid | 30.82 | 22.17 |
| Bra011448.1-P | Field mustard | plastid | 32.8 | 20.78 |
| PGSC0003DMT400032725 | Potato | nucleus | 33.6 | 17.68 |
| CDX75361 | Canola | plastid | 28.03 | 16.73 |
| Solyc01g105020.2.1 | Tomato | nucleus, plastid | 33.8 | 16.18 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G371600.1 | EnsemblPlantsGene:TraesCS1A01G371600 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 | InterPro:IPR001932 |
| InterPro:IPR036457 | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | PANTHER:PTHR12320 |
| PANTHER:PTHR12320:SF36 | PFAM:PF07228 | PFscan:PS51746 | SEG:seg | SMART:SM00331 | SMART:SM00332 |
| SUPFAM:SSF81606 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:548558073..548563884
Molecular Weight (calculated)
51857.9 Da
IEP (calculated)
4.324
GRAVY (calculated)
-0.280
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MAELPLAGGL LDLRPGGKLS PKPPPPPLPM PCRRSPPRSQ VAAAVASPCR AVPELHSTTE LADGSVVFHF AHPPVKDHPE PKASGPDPGH ADASASPRPE
101: LRVEEPNPHT AADAGEISLA SSEAPEQAVS SGVGVEAEAG LASGRAVLPA DCQLDTDGSG GELGASEESE AVEADTTAPA GLEEVDADAG ASSEGSVTQD
201: SHTGVDAECS SDDQEATESG ITIPPAAGEV HNKVDREKNT SEVKSSDRTV PVASSTLLLT SGAAILPHPS KAATGGEDAY FIEHNGWFGV ADGVGQWSFE
301: GINAGLYARE LMDGCKKVIA ESEGGSELSP EQVLSKAAAE ARSPGSSTVL VAHFDGQLLH VSNIGDSGFL VIRNGEVHAK SKPMVYGFNF PHQIEKGVDP
401: LTLVENYTID IEEGDVIIAA TDGLFDNVYE QESAAMISKS LQADLKPAEM AEHLAARAHE VGRSGARRSP FSDSAVAAGY LGFSGGKLDD TAVVVSIVRR
501: SEA
101: LRVEEPNPHT AADAGEISLA SSEAPEQAVS SGVGVEAEAG LASGRAVLPA DCQLDTDGSG GELGASEESE AVEADTTAPA GLEEVDADAG ASSEGSVTQD
201: SHTGVDAECS SDDQEATESG ITIPPAAGEV HNKVDREKNT SEVKSSDRTV PVASSTLLLT SGAAILPHPS KAATGGEDAY FIEHNGWFGV ADGVGQWSFE
301: GINAGLYARE LMDGCKKVIA ESEGGSELSP EQVLSKAAAE ARSPGSSTVL VAHFDGQLLH VSNIGDSGFL VIRNGEVHAK SKPMVYGFNF PHQIEKGVDP
401: LTLVENYTID IEEGDVIIAA TDGLFDNVYE QESAAMISKS LQADLKPAEM AEHLAARAHE VGRSGARRSP FSDSAVAAGY LGFSGGKLDD TAVVVSIVRR
501: SEA
001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST
Arabidopsis Description
Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.