Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G371600.1 | Wheat | peroxisome, plastid | 93.32 | 91.65 |
| TraesCS1B01G391400.1 | Wheat | peroxisome, plastid | 90.89 | 89.26 |
| HORVU1Hr1G082540.4 | Barley | peroxisome, plastid | 88.26 | 87.2 |
| OQU91878 | Sorghum | cytosol | 27.53 | 67.33 |
| Os10t0370000-02 | Rice | peroxisome | 60.12 | 63.87 |
| Zm00001d014291_P001 | Maize | plastid | 58.3 | 50.97 |
| TraesCS4D01G267000.1 | Wheat | cytosol | 49.8 | 44.48 |
| CDY72337 | Canola | cytosol, peroxisome | 26.32 | 36.83 |
| GSMUA_Achr2P22130_001 | Banana | plastid | 47.98 | 30.94 |
| TraesCS6D01G099700.1 | Wheat | mitochondrion | 22.27 | 28.5 |
| TraesCS3D01G100600.1 | Wheat | plastid | 18.42 | 28.26 |
| VIT_12s0055g01130.t01 | Wine grape | plastid | 41.7 | 26.68 |
| TraesCS7D01G360300.1 | Wheat | plastid | 16.8 | 25.86 |
| TraesCS6D01G214500.1 | Wheat | cytosol | 15.99 | 25.24 |
| TraesCS5D01G472400.1 | Wheat | plastid | 23.48 | 24.12 |
| KRH10513 | Soybean | mitochondrion, plastid | 36.84 | 23.39 |
| AT4G33500.1 | Thale cress | plastid | 33.0 | 22.51 |
| GSMUA_Achr6P10470_001 | Banana | nucleus | 40.89 | 22.47 |
| CDX68984 | Canola | plastid | 31.17 | 22.03 |
| Bra011448.1-P | Field mustard | plastid | 32.59 | 20.28 |
| PGSC0003DMT400032725 | Potato | nucleus | 35.22 | 18.2 |
| CDX75361 | Canola | plastid | 28.74 | 16.84 |
| Solyc01g105020.2.1 | Tomato | nucleus, plastid | 35.02 | 16.46 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G378200.1 | EnsemblPlantsGene:TraesCS1D01G378200 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 | InterPro:IPR001932 |
| InterPro:IPR036457 | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | PANTHER:PTHR12320 |
| PANTHER:PTHR12320:SF36 | PFAM:PF07228 | PFscan:PS51746 | SEG:seg | SMART:SM00331 | SMART:SM00332 |
| SUPFAM:SSF81606 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:454222590..454228434
Molecular Weight (calculated)
50886.0 Da
IEP (calculated)
4.301
GRAVY (calculated)
-0.275
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MAELPLAGGL LDLRPGKLSP KPPPPPLPMP CRRTPPRSQV AAAVASPCRA VPELHSTTEL ADGSVVFHFA HPPVKDRPEP TASGPGADAP ASPRPELRVE
101: EPNPHTVADA GEISLASSEE PEQAVGSGVG VEAEAGFASG RTVPPADCQL DTDGNGVELG ALEEGETVEA GMTGPAGLED ADADGGASSE GSDTGVDAES
201: RGDDQGATES GVTIPPATGE VRNKVNREKN TSEVKSSDRT VPVASSTLLL TSGAAILPHP SKAATGGEDA YFIEHNGWFG VADGVGQWSF EGINAGLYAR
301: ELMDGCKKVI AESEGGSELS PEQVLSKAAA EARSPGSSTV LVAHFDGQLL HVSNIGDSGF LVIRNGEVHA KSKPMVYGFN FPHQIEKGVD PLTLVENYTI
401: DIEEGDVIIA ATDGLFDNVY EQEAAAMISK SLQADLKPAE MAEHLAARAH EVGRSGAGRS PFSDSAVAAG YLGFSGGKLD DTAVVVSIVR RSEA
101: EPNPHTVADA GEISLASSEE PEQAVGSGVG VEAEAGFASG RTVPPADCQL DTDGNGVELG ALEEGETVEA GMTGPAGLED ADADGGASSE GSDTGVDAES
201: RGDDQGATES GVTIPPATGE VRNKVNREKN TSEVKSSDRT VPVASSTLLL TSGAAILPHP SKAATGGEDA YFIEHNGWFG VADGVGQWSF EGINAGLYAR
301: ELMDGCKKVI AESEGGSELS PEQVLSKAAA EARSPGSSTV LVAHFDGQLL HVSNIGDSGF LVIRNGEVHA KSKPMVYGFN FPHQIEKGVD PLTLVENYTI
401: DIEEGDVIIA ATDGLFDNVY EQEAAAMISK SLQADLKPAE MAEHLAARAH EVGRSGAGRS PFSDSAVAAG YLGFSGGKLD DTAVVVSIVR RSEA
001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST
Arabidopsis Description
Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.