Factsheet for TraesCS1B01G391400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	89.26	90.89
TraesCS1A01G371600.1	Wheat	peroxisome, plastid	90.46	90.46
HORVU1Hr1G082540.4	Barley	peroxisome, plastid	85.29	85.8
OQU91878	Sorghum	cytosol	26.84	66.83
Os10t0370000-02	Rice	peroxisome	58.65	63.44
Zm00001d014291_P001	Maize	plastid	57.06	50.8
TraesCS4B01G267400.1	Wheat	cytosol	46.32	41.91
CDY72337	Canola	cytosol, peroxisome	25.84	36.83
GSMUA_Achr2P22130_001	Banana	plastid	46.72	30.68
TraesCS3B01G116700.1	Wheat	plastid	18.49	28.88
TraesCS6B01G139200.1	Wheat	mitochondrion	21.67	26.72
VIT_12s0055g01130.t01	Wine grape	plastid	40.36	26.3
TraesCS6B01G262200.1	Wheat	cytosol	15.71	25.24
TraesCS7B01G266200.1	Wheat	plastid	15.71	24.61
TraesCS5B01G470500.1	Wheat	plastid	22.66	23.8
KRH10513	Soybean	mitochondrion, plastid	36.18	23.39
AT4G33500.1	Thale cress	plastid	32.6	22.65
GSMUA_Achr6P10470_001	Banana	nucleus	39.96	22.36
CDX68984	Canola	plastid	31.01	22.32
TraesCS3B01G217600.1	Wheat	cytosol	17.89	22.0
Bra011448.1-P	Field mustard	plastid	33.0	20.91
PGSC0003DMT400032725	Potato	nucleus	34.0	17.89
CDX75361	Canola	plastid	27.83	16.61
Solyc01g105020.2.1	Tomato	nucleus, plastid	34.59	16.56

Protein Annotations

EnsemblPlants:TraesCS1B01G391400.1	EnsemblPlantsGene:TraesCS1B01G391400	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PANTHER:PTHR12320:SF36	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:624724767..624731104

Molecular Weight (calculated)

51807.2 Da

IEP (calculated)

4.250

GRAVY (calculated)

-0.223

Length

503 amino acids

Sequence
(BLAST)

001: MAELPLAGGL LDLRPGKLSP KPPPPPLPMP CRRTPPRSQV AAAVASPCRA VPELHSTTEL ADGSVVFHFA HPPVKDHPEH KPSGPGADAP ASPRPELRVD
101: EPNPQIPHTA ADAGETLASS EAPVPTVGSG VGVCVEAESE LAGGRAVLPA DCQLDTDGNG VELGALEESG TVVSDTTAPA GLEEVDADAG ASPEGSATQD
201: SDTGVDAESR GDDQGATESR VTIPPTAGEV HNKVDWEKNT SEVKSSDKTA PVASSALLLT SGAAILPHPS KAATGGEDAY FIEDNGWFGV ADGVGQWSFE
301: GINAGLYARE LMDGCKKVIA ESEGGSELAP EQVLSKAAAE ASSPGSSTVL VAHFDGQLLH VSNIGDSGFL VIRNGEVCAK SKPMVYGFNF PHQIEKGVDP
401: LTLVENYTID IEEGDIIIAA TDGLFDNVYE QEMAAMISKS LQADLKPAEM AEHLAARAHE VGRSGAGRSP FSDSAVAAGY LGFSGGKLDD TAIVVSIVRR
501: SEA

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.