Factsheet for Solyc01g105020.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 2
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032725	Potato	nucleus	80.69	88.7
HORVU1Hr1G064790.1	Barley	cytosol, peroxisome	8.75	48.94
OQU91878	Sorghum	cytosol	8.94	46.53
HORVU5Hr1G117220.2	Barley	mitochondrion	9.32	44.75
HORVU2Hr1G018620.1	Barley	cytosol	6.18	43.62
Zm00001d048203_P002	Maize	nucleus, peroxisome, plastid	14.56	42.74
CDY72337	Canola	cytosol, peroxisome	13.51	40.23
Os10t0370000-02	Rice	peroxisome	16.56	37.42
TraesCS1D01G378200.1	Wheat	peroxisome, plastid	16.46	35.02
Os03t0192500-01	Rice	cytosol	18.74	34.62
TraesCS1B01G391400.1	Wheat	peroxisome, plastid	16.56	34.59
TraesCS4A01G038300.1	Wheat	cytosol	17.79	33.82
TraesCS1A01G371600.1	Wheat	peroxisome, plastid	16.18	33.8
TraesCS4D01G267000.1	Wheat	cytosol	17.7	33.63
HORVU1Hr1G082540.4	Barley	peroxisome, plastid	15.89	33.4
TraesCS4B01G267400.1	Wheat	cytosol	17.51	33.09
Zm00001d014291_P001	Maize	plastid	17.6	32.74
KXG39979	Sorghum	cytosol	17.41	30.76
VIT_12s0055g01130.t01	Wine grape	plastid	21.69	29.53
Solyc07g064390.1.1	Tomato	cytosol	7.61	28.57
KRH10513	Soybean	mitochondrion, plastid	21.03	28.41
Solyc12g005190.1.1	Tomato	plastid	10.09	28.12
AT4G33500.1	Thale cress	plastid	19.03	27.62
CDX68984	Canola	plastid	18.27	27.47
Solyc06g007350.2.1	Tomato	plastid	7.99	27.45
GSMUA_Achr2P22130_001	Banana	plastid	19.89	27.28
Solyc01g081000.2.1	Tomato	cytosol	8.18	27.13
Solyc04g025640.1.1	Tomato	cytosol	2.28	26.37
Solyc07g064310.1.1	Tomato	mitochondrion	9.32	26.27
Solyc10g079180.2.1	Tomato	cytoskeleton, cytosol, peroxisome	7.71	25.47
Solyc04g080090.2.1	Tomato	mitochondrion, plastid	9.13	25.33
Bra011448.1-P	Field mustard	plastid	18.84	24.94
GSMUA_Achr6P10470_001	Banana	nucleus	20.46	23.92
Solyc09g010590.1.1	Tomato	nucleus	4.0	23.33
CDX75361	Canola	plastid	17.32	21.59
Solyc12g089090.1.1	Tomato	mitochondrion	10.66	21.58
Solyc12g026410.1.1	Tomato	cytosol	5.04	17.61

Protein Annotations

EnsemblPlants:Solyc01g105020.2.1	EnsemblPlantsGene:Solyc01g105020.2	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	ncoils:Coil
PANTHER:PTHR12320	PANTHER:PTHR12320:SF9	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0002768D7C	UniProt:K4B274	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1:-:93319628..93326299

Molecular Weight (calculated)

113100.0 Da

IEP (calculated)

3.662

GRAVY (calculated)

-0.390

Length

1051 amino acids

Sequence
(BLAST)

0001: MADSLCKFLD GRCITGSQFF ATYFSAQKPF LFPTLVRRKR RRKSLHIAFC STPISTNLDV VSTHEHSDGT LLFRFGDPRE IAKEDELEEP LLDSEEEFSV
0101: VKVLDGDNER EVIVKKVERE ARGEAVTVVT DAGVSESVVI GNGRNDLVEV ETGLSKNFLG DSAVEIGSFS PEGIQNESVA EVDIENAVHV EEIFEKKDDS
0201: EASVPPPPEN SITSLEVEEE MMGQTSDESF EELDDDKSLV LSSPTAMPVY SDLVNTKEIE EFEGEGSSQL TENDGDKDCC YDSTHSKENG AASADIEAAH
0301: NDIEIVQQIE QISENIGSIL EGSTESVPEG INLGNAKTVA DEISPENAPE GINLGNTETV GDEISPDNAP EGINLGNTEA VVDEISSDNA PEGIDKGNTE
0401: TVVDEISSDN SPEGNDQGNT ETVVDEISLE NSLDGIDLGN TETVVDEISL EKSLDGIDLG NTETVVDEIS LENSLNGIDL GNTETVVDEI SLENSLDGID
0501: LGNTGTVVDE ISLQNSLDGI DLGNTETVVD EINLENSLDG IDLGNTETVV DEISLKNSLD GIDLGNTETV VEEISLENFL DGIDLGNTET VIDEISLENS
0601: LDGIDLGNTE TVVDEISLEN APDGLDLGNS ETFVDKISPE NALGGINLGN TETVVDEISP ENVDIRHLSM DAEDQSIEVL NFENDEQTEL SNLSVDTEDQ
0701: ASRNSTFKDS DVTEVMPDSP KLEAEPVFDE EVDHNIISES NESESPLPSD ENLPSLSLEE ERKEDVENNE IMEVYGHEVV EDKSSEVLVS SKEATPAAAE
0801: LILSSGATLL QYPSKAFAGG HEAYFIACGK WLGVADAVGS WSLEGSDPGV YAQELMQNSQ SIVSQCDKDS INDPKQVLNL SVSKTDSPGS STVLIAHFDG
0901: KALHVANIGD SGFIIVRNGN VYRKSSPMLH EFNLPIQIEK GDDPYQLLEE YKIELDEGDI IVTATDALFD NLYDQEIVSI ASRSLEADKS PQEIAEILAT
1001: RVQQVGSSAS GRSPFADAAQ AAGYVGYTGG KRDDVAAIVS VVQKVIVSNN N

Best Arabidopsis Sequence Match ( AT4G33500.1 )
(BLAST)

001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST

Arabidopsis Description

Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.