Factsheet for Solyc04g080090.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
peroxisome 1
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013180	Potato	mitochondrion	97.36	93.89
GSMUA_Achr8P31180_001	Banana	cytosol	28.23	66.05
Solyc12g089090.1.1	Tomato	mitochondrion	73.35	53.56
TraesCS6A01G111100.1	Wheat	mitochondrion	51.98	51.3
TraesCS6D01G099700.1	Wheat	mitochondrion	51.72	50.78
VIT_18s0001g12160.t01	Wine grape	extracellular	67.81	49.52
GSMUA_Achr9P09210_001	Banana	mitochondrion, plastid	61.21	49.36
GSMUA_Achr6P35080_001	Banana	plastid	60.69	48.73
AT4G16580.1	Thale cress	mitochondrion	59.63	48.39
Bra038489.1-P	Field mustard	mitochondrion	59.1	47.97
CDY60192	Canola	mitochondrion	59.1	47.97
KRH15248	Soybean	mitochondrion	63.59	47.63
TraesCS6B01G139200.1	Wheat	mitochondrion	51.19	47.55
CDY40532	Canola	mitochondrion	58.84	47.55
Solyc12g005190.1.1	Tomato	plastid	46.97	47.21
HORVU6Hr1G019900.1	Barley	plastid	53.56	47.21
KRH05793	Soybean	mitochondrion	61.48	46.05
Solyc07g064310.1.1	Tomato	mitochondrion	45.12	45.84
GSMUA_AchrUn_...	Banana	plastid	54.88	44.07
EER90674	Sorghum	mitochondrion, plastid	53.83	43.78
Zm00001d013027_P002	Maize	mitochondrion	53.83	43.59
Zm00001d034575_P001	Maize	plastid	52.51	42.7
Os03t0809300-01	Rice	plastid	52.24	41.34
Solyc07g064390.1.1	Tomato	cytosol	28.23	38.21
Solyc01g081000.2.1	Tomato	cytosol	31.13	37.22
Solyc10g079180.2.1	Tomato	cytoskeleton, cytosol, peroxisome	30.87	36.79
Solyc09g010590.1.1	Tomato	nucleus	15.83	33.33
Solyc04g025640.1.1	Tomato	cytosol	7.39	30.77
Solyc06g007350.2.1	Tomato	plastid	23.75	29.41
GSMUA_Achr8P31190_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	25.07	27.78
Solyc12g026410.1.1	Tomato	cytosol	20.84	26.25
Solyc01g105020.2.1	Tomato	nucleus, plastid	25.33	9.13

Protein Annotations

EnsemblPlants:Solyc04g080090.2.1	EnsemblPlantsGene:Solyc04g080090.2	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR12320
PANTHER:PTHR12320:SF16	PFAM:PF07228	PFscan:PS51746	SEG:seg	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI000276565A	UniProt:K4BV88	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4:-:64368065..64372599

Molecular Weight (calculated)

40303.8 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.059

Length

379 amino acids

Sequence
(BLAST)

001: MPSNYLFRVG GALCQGIRKS ISGQERGLQL VEIFSEERLL FGKSFCSVPS AGLSDLHVFV RPGAFAAAPT NLNIVNQRKN ISGISAIPRT FGLKGFHSSS
101: AACISAGAAP DVSFDNSLKI HIDRSLKLDS GSSYLPHPDK EEKGGEDAHF ICIDEQVIGI ADGVGGWADV GVDAGEYSRE LMANAVMAIR EEPKGSVDPA
201: RVLEKAYTLT RAKGSSTACI IALTDQGLHA INLGDSGFMV IRDGCTVLKS PVQQHDFNFT YQLESGGTGG DSPTSGEVFK IPVAPGDVII AGTDGLFDNL
301: YTSDITAVVV HARRAHLPPQ VVAQKIAALA RERALDKNRQ SPFSAAAQDA GIRFYGGKLD DVTVVVSYIT SDKNEKLTF

Best Arabidopsis Sequence Match ( AT4G16580.1 )
(BLAST)

001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH

Arabidopsis Description

Probable protein phosphatase 2C 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.